| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7351 |
|---|
| Symbol | |
|---|
| ID | 5149069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7715968 |
|---|
| End bp | 7716468 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640562012 |
|---|
| Product | putative protease |
|---|
| Protein accession | YP_001243121 |
|---|
| Protein GI | 148258536 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3577] Predicted aspartyl protease |
|---|
| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTCG CCGCCGTTCT TGTCGGCCTC GGCACCTTCA TGGCGCAGTT GGCCGACCGC
CTGACGCCCG CGCCGGCATC AGCCACGCCC GCGGTGCGGG CCGCCTCGCT GGAATCGGCG
GCTGCCGGCC AGCGCAGCCT GAGCATTCCG ACCGATCGTC GCGGCCATTT CCGGGCCGAC
GGGCGCATCG ACGGCCAGCG AATCAGCTTC ATGGTCGATA CCGGCGCGTC GATGGTGGCT
CTCAATGAGA GTTCTGCCGC CCGCTTCGGC CTGCGCCCGG CGCGCGGCGA CTACACCGCC
AACGTCACCA CCGCGAACGG CACCGTGAAG GCGGCGCGGG CGAGGCTCGC AATGGTCGAG
CTCGGCGAGC TCACCGTGCG CGATGTGGAG GCATTGGTGC TGCCCGACAC GGCGTTGTCG
GAGAACCTGC TCGGCCTGTC CTTCCTGTCC AAGCTCAAGC GCTTTGCCTA TGCCAACGGC
GAGATGGTGC TGGAGCAATA A
|
|---|
| Protein sequence | MIFAAVLVGL GTFMAQLADR LTPAPASATP AVRAASLESA AAGQRSLSIP TDRRGHFRAD
GRIDGQRISF MVDTGASMVA LNESSAARFG LRPARGDYTA NVTTANGTVK AARARLAMVE
LGELTVRDVE ALVLPDTALS ENLLGLSFLS KLKRFAYANG EMVLEQ
|
|---|
| |