| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7335 |
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| Symbol | truA |
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| ID | 5149518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7701636 |
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| End bp | 7702373 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561995 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001243105 |
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| Protein GI | 148258520 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.326558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCGCT ACAAGCTCAC TATCGAATAT GACGGCACGC CATTCTGCGG CTGGCAGCTG
CAGGAGACGC TACCGTCGGT GCAGGGCGCG CTGGAGGCGG CGGTGCAGGC GACCTGTGGC
GTGCCGACCC GCGTGCACGG GTCAGGCCGC ACGGATGCCG GCGTCCACGC CACCGGCCAG
GTCGCGCATT GCGACATTGC CAAGGACTTC CGGCCCGACA AATTGCGCGA TGCGCTCAAC
GCGCATCTGC GGCCGAACCC GGTCGCGGTG CTTGAGGCCG AGATCGTTTC CGATACGTTC
GAGGCACGCT TCTCGGCCCG TAAGCGGCAC TATCGCTATC GGATCGTCAA TCGGCGCTCC
AATCTCGCGC TCGAGGTCGG GCGTGTCTGG CGTGTGCCGC AGCGGCTTGA TTCCGATGCG
ATGCATGCCG CTGCACAGAG GCTGATCGGC AGGCACGACT TCACCACGTT CCGTGACACA
GAATGTCAGG CGAAATCGCC CGAGAAGACG CTCGATCAGC TCGATGTCGT CAGGGACGGG
GACGCGGTGA CCATCCTGAC CTCGGCTCGC TCCTATCTGC ACAGCCAGGT GCGCTCGATG
GTGGGATCGC TGGTATGGGT CGGGCAGGGC CGCTGGAGCG CCGATGATCT CGCCGCCGCG
CTGGCCGCGC GCAACCGCGC CGCCTGCGGT GTCGTGGCGC CCCCGGAAGG GCTGTACCTG
GTCAAGGTGG ATTATTGA
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| Protein sequence | MPRYKLTIEY DGTPFCGWQL QETLPSVQGA LEAAVQATCG VPTRVHGSGR TDAGVHATGQ
VAHCDIAKDF RPDKLRDALN AHLRPNPVAV LEAEIVSDTF EARFSARKRH YRYRIVNRRS
NLALEVGRVW RVPQRLDSDA MHAAAQRLIG RHDFTTFRDT ECQAKSPEKT LDQLDVVRDG
DAVTILTSAR SYLHSQVRSM VGSLVWVGQG RWSADDLAAA LAARNRAACG VVAPPEGLYL
VKVDY
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