| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7333 |
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| Symbol | dapE |
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| ID | 5149516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7698255 |
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| End bp | 7699409 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561993 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001243103 |
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| Protein GI | 148258518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATG CCCTCACCAT CACCCGCGAT CTGATCCGCT GCCCCTCCGT GACCCCCGCC
GATGCCGGGG CGCTCGGTGT GCTCGAAGCC CTGCTGAAAC AGGCCGGCTT CACGACCCAC
CGCATCACCT TTTCGGAAGC AGGCACGGCC GACATCGACA ATCTCTACGC TCGCATCGGC
ACCGAGGGTC CGCACATCAC CTTCGCCGGC CATACCGACG TGGTCCCGCC CGGTGACGAA
GCGGCCTGGA GCCTTCCGGC GTTCTCGGGC GAGGTGAGGG ACGGCTATAT CTACGGCCGC
GGCGCGGTCG ACATGAAGGG CGGCATCGCC TGCAGCGTCG CCGCCGCGCT GGATTATCTG
CGCGATCACG ACGGGCAGCC GAAAGGCTCG ATCTCGTTCC TGATCACCGG CGACGAGGAG
GACGTCTCGA TCAACGGCAC CATCAAGCTG TTACAATGGG CGGCCGAGCG CGGCGAAAAA
TTCGACCATT GCGTGCTCGG CGAGCCGTCG AACCAGGAGG TCATGGGCGA CTGCATCAAG
ATCGGCCGCC GCGGCTCGCA GTCCGGCACG CTGATCGTCG AGGGCAGGCA GGGCCACGTC
GCCTATCCGC ACCGCGCCGA GAATCCGGTG CCCGACATCT CTCGCCTGAT CGTCGCGCTG
TCGGACGAAC CGTTGGATCA CGGCAGTGCG CAATTCCAGC CGTCGAACCT CGAATTCACC
AGCGTCGATG TCGGAAACAC GGCATCCAAC GTCATCCCGG GCCTGGCACG CGCGAAGTTC
AACATCCGCT ACAATGACTG TCACACGCAG GACTCGCTGC GGGCGCTGGT CGAGGAACGG
CTGGCCAAGG CCTGCGGAAA CCGCATCCGC GCCCATATCG ACTGGCTGCC GTCGAACTCC
AAAGTGTTCC TGACCAAGCC GGGGCCATTC ACCGACCTCG CCGTCGCCGC CATCGAGAGC
GTGACCGGAC GCAAGCCGGA GCTCTCCACG ACCGGCGGCA CCTCGGATGC GCGCTTCATT
GCGAGCTATT GCCCGGTCAT CGAGTTCGGC CTGGTCGGGC AGACCATGCA CCAGATCGAC
GAGCGCGCTT CCGTCGCGGA TATCGCCACC CTGACGAAGA TCTATCGCGG CATTCTCGAT
CGCTATTTCG CCTGA
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| Protein sequence | MTDALTITRD LIRCPSVTPA DAGALGVLEA LLKQAGFTTH RITFSEAGTA DIDNLYARIG
TEGPHITFAG HTDVVPPGDE AAWSLPAFSG EVRDGYIYGR GAVDMKGGIA CSVAAALDYL
RDHDGQPKGS ISFLITGDEE DVSINGTIKL LQWAAERGEK FDHCVLGEPS NQEVMGDCIK
IGRRGSQSGT LIVEGRQGHV AYPHRAENPV PDISRLIVAL SDEPLDHGSA QFQPSNLEFT
SVDVGNTASN VIPGLARAKF NIRYNDCHTQ DSLRALVEER LAKACGNRIR AHIDWLPSNS
KVFLTKPGPF TDLAVAAIES VTGRKPELST TGGTSDARFI ASYCPVIEFG LVGQTMHQID
ERASVADIAT LTKIYRGILD RYFA
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