| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7263 |
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| Symbol | czcA |
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| ID | 5155096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7628806 |
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| End bp | 7631988 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640561935 |
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| Product | RND divalent metal cation efflux transporter CzcA |
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| Protein accession | YP_001243046 |
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| Protein GI | 148258461 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.24626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGCG TTTTTGTCAT GGCCGCTTTC GGAGCGTGGA ATTTCACGCG TCTGCCGATC
GACGCCGTGC CTGACATCAC CAACGTTCAG ATCCAGATCA ACAGTCGCGC GCCCGGCTAT
TCGCCGCTGG AAGTCGAGCA GCGGATCACG TTTCCGATCG AGACCGCGAT GGGAGGTTTG
CCTCATCTGG ACAGCACCCG CTCCCAATCC CGCTACGGCT TGAGCCAGGT CACCATCATC
TTCAAAGACG GGACCGACAT CTATTTCGCC CGGCAATTGG TCAACGAGCG GATTCAGCAG
GTCAAGGACC AGCTTCCGCC CAGCATCGAA ACTGCGATGG GACCAATCTC TACCGGCCTC
GGTGAAATCT ATCTGTTCAC CGTCGAGGCA AAACCGGAAG CACGCAAAAC CGGCGGTGAC
GAATACACGC CAAGCGACCT GCGGACGATC CAGGATTGGA TCATCAAGCC ACAACTACGG
AATGTTCCCG GCGTCATCGA GGTCAACACC ATTGGCGGCT TCGAACGGCA ATTCCATGTG
CTGCCGGATC CGGCGCAACT GATGGCCTAC AAGCTCAGTT TTCGCGAGGT CATGACGGCG
CTGGCCGCGA ACAATGCCAA CGTTGGAGCG GGGTATATCG AACGCAACGG CGAGCAGTAT
CTCGTTCGCA CGCCCGGCCA GGTCGCAAAT GTCGAGGAAA TAAAGCAGAT CGTGATCGGC
TCCCGCCACG GCGTACCTGT GCGGGTGATG GACGTGGCCG ATGTCAAGGA AGGCAAGGAC
CTGCGAACGG GTGCGGCAAC GGTGGACGGC AAGGAGGTGG TGTTAGGCAC CGCCATGCTG
CTGATCGGCG ACAATAGCCG GACAGTAGCT CAACGCGTGG CGGCAAAGCT GAAGGAGATC
GGGCGGTCCC TGCCGGAAGG CGTGATCGCA CGAGCCGTCT ATGACCGGAC CAAGCTGGTC
GAGGCGACGG TTGCGACCGT GGAAAAGAAC CTCGTCGAAG GCGCTCTTCT CGTCATCGTG
ATCCTGTTCC TGATCCTTGG AAACTTCAAG GCGGCGATCG CCACCGCCTT CGTCATCCCG
CTGTCCATGC TGTTTACCAT TACCGGCATG GTGGAAAACA AGGTCAGCGC AAACCTGATG
AGCCTTGGCG CCATCGACTT CGGCATCATC ATCGACGGCG CGGTGATCAT CGTTGAGAAT
TGCCTGCGCT TATTGGCCGA GGAGCAAACC AGGCAGGGCC GTGTCCTCGA TCGGCAGGAA
CGGTTCGAAA CCATCTTGAC GGCGTCAAAA GAAGTGATTG GTCCGAGCCT GTTCGGGACG
TTGATCATCG GCGTCGTGTA TCTGCCGATC CTGACGCTCA CCGGCGTCGA AGGAAAGATG
TTCACGCCGA TGGCGTTGAC AGTGCTGATG GCGCTAACCG GCGCGAGCAT CCTGTCGCTG
ACGTTCGTGC CGGCTGCCGT GGCCTTGCTG GTGACCGGCA AAGTCTCCGA GCATGAGAAC
TGGTTCATGC GCGGTGCGCG CTATGTTTAC ACGCCACTGC TCGCCGCTTC GATCCGCAAC
AGATGGGGCG TTGCGGGAAT CGCGGTCCTG CTGATGGCCG TGTGCGGCAT CGCGGCTTCC
CGCATGGGCG GGGAGTTCAT TCCGAGCCTC GACGAAGGTG ATGTTGCACT GCAGGCGATC
CGTATTCCCG GCACCAGCCT GACGCAGTCG CTGGAGATGC AGGCCATGCT CGAAAGGCGA
TTATTGAAGA TACCGGAGGT CCGGGAAGTG TTTGCCCGCA CCGGAACCGC GGAAGTTGCA
ACCGACCTGA TGCCGCCCTC GACGTCCGAC GGATACGTGA TGTTGAAACC GAGGAAGGAA
TGGCCCGATC CGGAGAAGCC AAAAGCTTCG GTTGTTTCCG AGATCCAGGA GGCCGCCGAA
GAGATCCCGG GCAACGTCTA TGAGATCTCG CAGCCGATCC AGCAACGCTT CAACGAGCTG
ATTTCCGGCG TCCGCAGCGA CGTCGGCGTC AAGATCTTTG GCGACGACCT CGACGTGCTC
GTCCAGTCCG CGGCCAAGGT GCAGGCAGTC CTGCAGGGTG TACAGGGCGC CGCCGACGTC
AAAACCGAAC AGGCGTCGGG GTTGCCTGTG CTTACGGTCA AGCTCAACCG TCAGGCGCTG
TCTCGCTACG GCATCAGCGT CGGCGACGTG CAGAACCTGG TCGAGATCGC CGTCGGCGGT
AAGAATTCCG GCATGGTGTT CGAAGGAGAT CGCCGTTTTA ACATCGTCGT CCGGCTTCCG
GAACATTTGC GTTCCGACAT CTCGGCGCTC AAGGCGCTTC CGGTGCCGCT TCCGCCGCTG
GAGAGCCAGG CCAAGCCGGT GACAGCGCTC TGGAGCAACT CGCCTCTTTC TCAGATTCGC
TATGTGCCGC TTTCGGAACT GGCCCAAATC GACGTCGCGC CCGGACCCAA TCAGATCAGC
CGCGAAAACG GCAAACGGCG AATTGTCGTG ACCGCGAATG TCCGTGGACG AGACCTCGGC
TCTTTCGTCG CGGACGCCCA AGAGCAGGTC GAAGCCAAGG TCAAACTTCC GGCCGGTTAT
TGGATCGGCT GGGGCGGCCA GTTCGAGCAA CTGGTGTCCG CGACGCAGAG GCTGACGATC
GTCGTGCCGG TCGCGCTTCT GTTGATTTTC CTGCTTTTGT TCATGAGCCT TGGTTCAATG
CCGGACGCGC TACTGGTGTT CAGTGGCGTA CCGCTGGCTT TGACTGGCGG AATTATCGCC
CTGCTGCTTC GAGGCATTCC GCTGTCGATC AGCGCCGGGA TCGGTTTTAT CGCCCTGTCC
GGCGTGGCGG TGCTCAACGG CCTCGTCATT ATTACTTTTA TCGAGCGGCT CCGGAGCGAG
GGCAAGAACG TGATCGATGC GGTCCGGGAA GGATCGTTGA CGCGGCTGCG GCCGGTGCTG
ATGACTGCGC TCGTCGCATC TCTCGGTTTC GTGCCCATGG CAATTGCGAC CGGCGCCGGG
GCAGAGGTGC AGCGGCCGTT GGCGACGGTC GTCATCGGCG GAATCATCTC GTCGACCATA
CTGACCTTGT TGGTACTACC GGCTCTCTAC GTCTTGTTCA GGCGGGAAGA TCTGGAAAAT
GGCGAATCCA AATCACAGGC TACAGAACCC AAATCACCGG CTACAGAAGG AGCAGTGTCA
TGA
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| Protein sequence | MIGVFVMAAF GAWNFTRLPI DAVPDITNVQ IQINSRAPGY SPLEVEQRIT FPIETAMGGL
PHLDSTRSQS RYGLSQVTII FKDGTDIYFA RQLVNERIQQ VKDQLPPSIE TAMGPISTGL
GEIYLFTVEA KPEARKTGGD EYTPSDLRTI QDWIIKPQLR NVPGVIEVNT IGGFERQFHV
LPDPAQLMAY KLSFREVMTA LAANNANVGA GYIERNGEQY LVRTPGQVAN VEEIKQIVIG
SRHGVPVRVM DVADVKEGKD LRTGAATVDG KEVVLGTAML LIGDNSRTVA QRVAAKLKEI
GRSLPEGVIA RAVYDRTKLV EATVATVEKN LVEGALLVIV ILFLILGNFK AAIATAFVIP
LSMLFTITGM VENKVSANLM SLGAIDFGII IDGAVIIVEN CLRLLAEEQT RQGRVLDRQE
RFETILTASK EVIGPSLFGT LIIGVVYLPI LTLTGVEGKM FTPMALTVLM ALTGASILSL
TFVPAAVALL VTGKVSEHEN WFMRGARYVY TPLLAASIRN RWGVAGIAVL LMAVCGIAAS
RMGGEFIPSL DEGDVALQAI RIPGTSLTQS LEMQAMLERR LLKIPEVREV FARTGTAEVA
TDLMPPSTSD GYVMLKPRKE WPDPEKPKAS VVSEIQEAAE EIPGNVYEIS QPIQQRFNEL
ISGVRSDVGV KIFGDDLDVL VQSAAKVQAV LQGVQGAADV KTEQASGLPV LTVKLNRQAL
SRYGISVGDV QNLVEIAVGG KNSGMVFEGD RRFNIVVRLP EHLRSDISAL KALPVPLPPL
ESQAKPVTAL WSNSPLSQIR YVPLSELAQI DVAPGPNQIS RENGKRRIVV TANVRGRDLG
SFVADAQEQV EAKVKLPAGY WIGWGGQFEQ LVSATQRLTI VVPVALLLIF LLLFMSLGSM
PDALLVFSGV PLALTGGIIA LLLRGIPLSI SAGIGFIALS GVAVLNGLVI ITFIERLRSE
GKNVIDAVRE GSLTRLRPVL MTALVASLGF VPMAIATGAG AEVQRPLATV VIGGIISSTI
LTLLVLPALY VLFRREDLEN GESKSQATEP KSPATEGAVS
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