Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7247 |
Symbol | |
ID | 5149366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7615025 |
End bp | 7615885 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640561919 |
Product | ABC transporter permease |
Protein accession | YP_001243030 |
Protein GI | 148258445 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00669088 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.643564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCGC ACGATGAAGC TGCTGGCCGT CTGGGGCTTG GCGCGCTCAG CAAACGCTCG CCGGGGCCGG CGCGGCCTGG AGTCGTTCTT CTGGCACGGA GATACTTTAC GAGCAGGGCG TTTGGCTGGT CGATCGTCCT ATTGGCTCTG GGGGCCTGGC AGATTGCCAG CACCCTTCAC CGGATGCCGC AACTTCCGCC CCTGACAGAC ATCGGCGCGG TCTGGCTCGA TCGTGTGCAG AACGGGGATC TGGTTGCTGC GGTGCTCGAG ACCTTGAGAA TCACCGTGAT CGGCTATGCA TTCGCAACCG TCACGGGCGT TGTGCTGGGC TTTCTGATGG GGCGTGTTCC GGTCGTGTGG GGTGGCGCCG AACCCGTCGT GGAGATCCTC CGCCAGATCC CTATCACCGC GCTGCTCCCC CTGCTGATCC TGTATCTTGG CATAGGCGAT AGTTTCAAGA TCGTCATCGT TATGCTGGCT GCGACGTTTC CGATCCTTCT GAATTCCTAT GCCGGCGCGC GCAGCATCTC CAAGACGATG GCGATGACGG CCCAGACCTT CCAACTGAAC TGGATCCAGA CACAGATCGA GATCGGCTTG CCGGCGGCAC TTCCCTACAT CCTCGTCGGG ATGCGTCAGG CGCTCGCGGT CACGTTGGTG ATCGCCGTCG TTACCGGAAT GCTGGCCGGC AATAGCGGCA TTGGCTACTT CATTCTCGAA GCGCAGCAGG TTCTCGACGT GAAGGCGCTG TTCGCCGGCA TCTTCACCAT CGCGGCGATC GGTTACGTTC TGAATGCGCT CTTTCTGATG GTCGAACAAC GGCTCACGCG CTGGCGGTCG CTCGGATCGG CCCGCCACTG A
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Protein sequence | MSSHDEAAGR LGLGALSKRS PGPARPGVVL LARRYFTSRA FGWSIVLLAL GAWQIASTLH RMPQLPPLTD IGAVWLDRVQ NGDLVAAVLE TLRITVIGYA FATVTGVVLG FLMGRVPVVW GGAEPVVEIL RQIPITALLP LLILYLGIGD SFKIVIVMLA ATFPILLNSY AGARSISKTM AMTAQTFQLN WIQTQIEIGL PAALPYILVG MRQALAVTLV IAVVTGMLAG NSGIGYFILE AQQVLDVKAL FAGIFTIAAI GYVLNALFLM VEQRLTRWRS LGSARH
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