| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7193 |
|---|
| Symbol | |
|---|
| ID | 5154767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7552202 |
|---|
| End bp | 7553248 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640561868 |
|---|
| Product | ABC transporter substrate-binding protein |
|---|
| Protein accession | YP_001242979 |
|---|
| Protein GI | 148258394 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.57881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTTG ATCGCCGCCG GCTCCTGACC AGCGCCTTGA CGCTGGGAGC CATGCATGCG
TTCCCGGGCC TGAGCCTCGC GCAAGCGCGG CCGCTGGTAT TCGCGACCTT CACCGGCAGC
TGGGAGGAGG CGCACAAGGC GGTGCTGGTG CCGGCGTTCC GCAAGGCCAA TGCGGATGCC
GCGATCGTGC TGGATCCGAT GCTGTCGGTC GACCAGATCG CCAAGGTCAA TGCCGCCAAG
GCCAATCCGC CGATCGACGT CATGCTGCAC GATCCGGGTC CGGCGCTGGT CGCGATCGGC
CAGGACCTCG TCGAGCCGTT CCCGGCCGAT AAGAGTGCGT ACTTCAAGGA CCTGATTCCA
GAAGCGCAGG ACGCGATGGG CCCGGCGCCG TTCTTCCAGG TCGTCGGCCT CACCTTCAAT
CCGGAGACCG TGAAGACGCC GCCGACATCA TGGGCGGATC TGTGGAAGCC GGAATTCAAG
GGCAAGGTCG GCATCACCAA TCTGAACTCG ACGCTCGGCA CCGGCTGGCT GGTTGAGATT
GCACGGATGC GCGGCGGCTC CGAGGCCAAT GTCGACGAAG GGTTCAAGGC GTTGGAGGAG
CTGAAGCCGA ACCTTGCCGC CGTCGCCGCC AATCCCGGCG CGCTGGCGAC GCTGTTCCAG
CAGGGCCAGA TCGACATCTC GCCGGGCAAT TTCAACGCCA TCCAGATCCT GAAAGCGCGC
GGCGTGCCGG TCGAGTTCGT GGCGCCGAAA GAAGGCGCGA TCGCCTTCAA GACCACGATC
CACATCGTCA AGAACTCGCC GAACAAGGAG CTGGCCTTCA AGCTGATCGA GGCGGCGCTG
TCGCCAGAGG TCCAGACGGC GCTGATGAAC CCGCCCTATC TGATCGTGCC GACCAACACC
AAGGTCGCGA TGACCGGCGA GATCGCCAAG GTGCTGGCCA AGGACACCGC GGAGCTGAAG
AAGAAGTTCG TGTTCCAGGA CTGGAAGAAG ATCAACGAGC AGCGCGCCTC CTGGATCGAA
AAGTTCAACC GCGACATCAA GATCTGA
|
|---|
| Protein sequence | MMLDRRRLLT SALTLGAMHA FPGLSLAQAR PLVFATFTGS WEEAHKAVLV PAFRKANADA
AIVLDPMLSV DQIAKVNAAK ANPPIDVMLH DPGPALVAIG QDLVEPFPAD KSAYFKDLIP
EAQDAMGPAP FFQVVGLTFN PETVKTPPTS WADLWKPEFK GKVGITNLNS TLGTGWLVEI
ARMRGGSEAN VDEGFKALEE LKPNLAAVAA NPGALATLFQ QGQIDISPGN FNAIQILKAR
GVPVEFVAPK EGAIAFKTTI HIVKNSPNKE LAFKLIEAAL SPEVQTALMN PPYLIVPTNT
KVAMTGEIAK VLAKDTAELK KKFVFQDWKK INEQRASWIE KFNRDIKI
|
|---|
| |