Gene BBta_7178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7178 
Symbol 
ID5155376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7535126 
End bp7536553 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content68% 
IMG OID640561853 
Producthypothetical protein 
Protein accessionYP_001242964 
Protein GI148258379 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTTC CCTATCAAGA CACGACCGGC CCGGGTGACG CCGGCCCACT CCGCGACGCG 
CGCCTGCGCG GCGGCCGGCC GCTGGTCGTC GATGTCGACG ACGTGCTGAT GCAGACGAGC
CTGTCGAGCG AGGCGATCTG GTCGGAGATC GCCCATCGTC CCGCAGCCGC CATCGCCTTG
GCCGCCGCCG TGCTGCGCGG TCCGGCCGAG CTGAAGCGAC GCCTGGCCAA TTCGGCACAT
TTCGATCCGG CCCGTCTCGC CTACGACACC GAAACCGTTG CTTATATGCT GCGCGTCCTC
GGCGAAGGCC GTCCGGTCTA TCTCGCCTCC GACACCTATG ACAGCGCGCT CGTCGGTGCC
ATCGCCCAGC ATCTCGGCGT ATTCACCGCC TGGACCGCCT CGGCGGATGG CGCCAGGCTC
GATCCGGAGG CCCTGAGCCT GCTGCAGTCC TGGAGTCAGG GCTTCGATTA TCTCGGCCAT
GATTCCGAAG TGCTGCCGGC CGGCGCGACG CGAATCCCGC GCCGCTCACC TGCGGCGCCG
TCCGTTGCGA CCAGCGATCC CGTCGGCTGG CGGGTCTGGG CGAAGCTGCT GCGCGTGCAT
CAATGGGCCA AGAACGCGCT CGTTCTGGTG CCACTGCTGA CGGCCCATCA ATTCGGCCTG
TGGCCGGCGA TCACGGCGCT GTTTGCGGCG CTTGCCTTTT CGCTCGGCGC CTCCGCGGCC
TACATCCTCA ACGACCTCGT CGATGTCAGC GCCGACCGCG CCCATGCCAC CAAGCGCGAG
CGGCCGATCG CCAGCGGCGC GATTGCTCCG GCGCAGGCCA TCGCCGCGAT GGCGCTGCTG
CTCATCGGCG CGATCACGAT CGCCGCGGTG GTCTCCCCGG CCTTCCTTGG CGTGCTTGCC
GGCTATCTCG CACTGACCAC CGCTTATTCG TTCCGGCTGA AGCGCCTTGC GCTGCTCGAC
GTGGTCACGC TGGCCGTGCT CTACACGATC CGCGTCGTCG CCGGCGCGGT CGCCATCGGC
GTCGCGATGT CGGAATGGCT GTTCGCATTC TCGCTCTTCA TCTTCATGGC CTTGGCGCTG
GTGAAGCGTT ACGTCGAGCT CGACCGCCGG AGCAGCGGCG ACCGGCCGCT GTCACGCGAT
TACCAGCCGA ACGACCGGGC GATGATCGCG GTCCTGGCGG CGGCCGCCGG CTTCAATGCC
GTCGTCATCT TCACGCTATA CATCTCGTCA GACGCGGTGC GCGCGCTCTA CGGTCATCCC
CAGATCATGT GGGCCAGCTG TCCGGTGCTG ATGTATTGGG TCGCCCGTGT GATGCTGTTC
GCCCAGCGCG GCCTGATCGA CGACGATCCG GTGATCTTTG CGCTGAAGGA CCGGGTCAGC
TGGCTCGCGC TCGGCACCAT CGGTGCGATC ATGCTCGCCG CAATGTAA
 
Protein sequence
MPLPYQDTTG PGDAGPLRDA RLRGGRPLVV DVDDVLMQTS LSSEAIWSEI AHRPAAAIAL 
AAAVLRGPAE LKRRLANSAH FDPARLAYDT ETVAYMLRVL GEGRPVYLAS DTYDSALVGA
IAQHLGVFTA WTASADGARL DPEALSLLQS WSQGFDYLGH DSEVLPAGAT RIPRRSPAAP
SVATSDPVGW RVWAKLLRVH QWAKNALVLV PLLTAHQFGL WPAITALFAA LAFSLGASAA
YILNDLVDVS ADRAHATKRE RPIASGAIAP AQAIAAMALL LIGAITIAAV VSPAFLGVLA
GYLALTTAYS FRLKRLALLD VVTLAVLYTI RVVAGAVAIG VAMSEWLFAF SLFIFMALAL
VKRYVELDRR SSGDRPLSRD YQPNDRAMIA VLAAAAGFNA VVIFTLYISS DAVRALYGHP
QIMWASCPVL MYWVARVMLF AQRGLIDDDP VIFALKDRVS WLALGTIGAI MLAAM