Gene BBta_7176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7176 
Symbol 
ID5155374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7532766 
End bp7533398 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID640561851 
Producthypothetical protein 
Protein accessionYP_001242962 
Protein GI148258377 
COG category[K] Transcription 
COG ID[COG5631] Predicted transcription regulator, contains HTH domain (MarR family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAGGG CTGATGGCGC CGCGGCGACG CGCAAGGCCG TGGCGGTGAA GGCGAAATCC 
GCCGGCCGTA GGACAGGTTC ACAGCCGGCC AAGGCACGCA ACGCCGCGGA TGCGAACGGC
GACAAGGGCT CCTGGCATCT CGCCCGCAGC GATGCGGAGC GGCGGCTGTC GGATTTCGAA
TTTGCGCTGG AGCGGCTGGC GCAGTCCTAT TACCGCTGGA AGGCGTCCTG CCTCGCAGCG
GTGTGCGAGG TACCGCTGAC CGGCGACGAC GTCGCCGTCC TCAATGTCGT GCGCATGGGC
GACGAGCCGA AACGGCTCGC CGAAGTCGGC CAATTGCTCA ACCGCGTCGA CGTGCCCAAT
CTGCAATATG CGACGCGCAA GTTGGTGCGC GCCGGCCTGA TCGAAACCGA AGGCCGCTCC
TCGCGCAAGG AGACGCGCTA CCGCGCCACC GCCCGCGGCC GCGCCGTCAC CGAGGACTAT
GCCGCCTTGC GCGCCACGAC GCTGCCGCCG CTGTTCGACG CGCTGCCCGG CTGGATCGAC
AGCTGCGCGG CAACCACCGC GCAACTCGAC CAGATGTCGG GACTCTATGG CCAAGCGGCG
CGCGTCGCCA TCACCAAGCG CCACCAGTCC TAA
 
Protein sequence
MKRADGAAAT RKAVAVKAKS AGRRTGSQPA KARNAADANG DKGSWHLARS DAERRLSDFE 
FALERLAQSY YRWKASCLAA VCEVPLTGDD VAVLNVVRMG DEPKRLAEVG QLLNRVDVPN
LQYATRKLVR AGLIETEGRS SRKETRYRAT ARGRAVTEDY AALRATTLPP LFDALPGWID
SCAATTAQLD QMSGLYGQAA RVAITKRHQS