Gene BBta_7170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7170 
Symbol 
ID5155528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7526126 
End bp7526986 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content67% 
IMG OID640561845 
Productpeptide ABC transporter ATP-binding protein 
Protein accessionYP_001242956 
Protein GI148258371 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TCCTGCTCCG CACCGGCCAG CTCGGCTTCG CCTATCCGGC GCGATCGACA 
TCGCCGTTCG GCAAGCCCGT GATGCGTGAC GTCATCAAAT CTGTCGATCT CGCGGTGCCG
CGCGGCGCGG TGCTCGGTCT CGTGGGCGAA TCCGGCTCTG GCAAGACCAC GCTCGGGCGG
CTTCTGGTGC GGCTGCTGGA GCCGACGTCG GGCGGCATCC AGTTCGACGG CACCGAGATC
AGCCACTTGT CGGAAGCTGC GTTGCGCCCG CTGCGCGCGC GGATCCAGAT GATCTTCCAG
GATCCGCAAT CGTCGCTCAA TCCGCGCCTG CCGCTGGCGG TGACCTTGAC GCGCCAGCTC
GAGGTCTATG GCCGGCTGAA GGGCAGGCGT GATCGCCGCG ACCGTGCCGC CGCGCTGCTC
GATCTCGTCG GTCTGCCGAC GGCGTTCGTC GACCGCTATC CGCACGAGCT CTCCGGTGGC
CAGCGCCAGC GCGCCGGCAT CGCGCGGGCT CTGGCGCTGC AGCCGGACTT CATCGTCGCC
GATGAGATCG TCTCCGGCCT CGACGTCTCC ACCCAGGCGC ATATCCTGAT GCTGTTGAAG
GAGCTGCGCG CCAAGCTTGG TCTCACGGTC GTCTTCATCA GCCATGACCT GTCGGTGATT
CGCGTGCTGT GCGACGAGGT CGCCATTCTT CGGGGCGGCG AGGTGGTGGA GCACGGTCCG
GTCGGCCGCA TCTTCTCCCA TCCGCAACAC GCCTATACGC GCCAGCTTCT TGCCGCCATT
CCGCTCCCCG ATGTCGAGCC GGGCTGGCTC GACGACATCC CGTCCCGTCA GCAACCCCAG
CAGCAGGGAT CAGCCGCATG A
 
Protein sequence
MSDILLRTGQ LGFAYPARST SPFGKPVMRD VIKSVDLAVP RGAVLGLVGE SGSGKTTLGR 
LLVRLLEPTS GGIQFDGTEI SHLSEAALRP LRARIQMIFQ DPQSSLNPRL PLAVTLTRQL
EVYGRLKGRR DRRDRAAALL DLVGLPTAFV DRYPHELSGG QRQRAGIARA LALQPDFIVA
DEIVSGLDVS TQAHILMLLK ELRAKLGLTV VFISHDLSVI RVLCDEVAIL RGGEVVEHGP
VGRIFSHPQH AYTRQLLAAI PLPDVEPGWL DDIPSRQQPQ QQGSAA