Gene BBta_7113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7113 
Symbol 
ID5153765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7455189 
End bp7455872 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content58% 
IMG OID640561790 
Productputative autoinducer (acylhomoserine lactone) synthase 
Protein accessionYP_001242901 
Protein GI148258316 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG3916] N-acyl-L-homoserine lactone synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.983538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.575549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGA TTCATGTCGT TCGCAGAGAT AATCGCGCGC TCTACGAGAA ATACTTTGAT 
CCATACTACC GGCTGCGTCA CGAGATCTAT GTCAAGCAAC GCAAATGGAT GGCGCTCGAT
CGTCCGGACG GGCGCGAGAT CGATCAATTC GACACCGAAG ATTCGGTCTA TCTGTTCTGT
ATCGACAAGG GCCAACTGAT CGGCTCGATG CGCGCGGTGC CGACAATGGT GCCGACGCTG
ATGAGCGACA TCTTTCCCTA TCTCAATCTG CGCGGACCGA TCCAGCGCCC GGACGTCTAT
GAGCTGTCGC GCATCTTTGT CATCCCCGAA CGCCGTGGCG AGCATGCCGG CCCACGGATT
GATCTGCTGC TGCTCACCGC GATCATGGAA TATGGCATCT CGATCGGGCT GACCGGTTTT
TCGATCGTCC TCGAAACCTG GTGGCTGCCC CGCTTCGAAA AATGCGGCTG GAAGGCGAAG
CCCTTGGGAG TGCCGCATAT GATGGACGGC ATGGCCGTCA TGGCCGTCCT TGTCGATTGC
GATGAGAGCA CCTGGAAGTC GCTGTGCAGC CAGATCGGCC TCACCCGTCC GACCCTGACC
TGGCAGGGAC TCGAAGGCGT CAGCCGCCAG GCCCTGCCGG ATATCTTTCT TCATCTTCCG
CCAGCCTTTC AGCCAGCGCA ATGA
 
Protein sequence
MPEIHVVRRD NRALYEKYFD PYYRLRHEIY VKQRKWMALD RPDGREIDQF DTEDSVYLFC 
IDKGQLIGSM RAVPTMVPTL MSDIFPYLNL RGPIQRPDVY ELSRIFVIPE RRGEHAGPRI
DLLLLTAIME YGISIGLTGF SIVLETWWLP RFEKCGWKAK PLGVPHMMDG MAVMAVLVDC
DESTWKSLCS QIGLTRPTLT WQGLEGVSRQ ALPDIFLHLP PAFQPAQ