Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7113 |
Symbol | |
ID | 5153765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7455189 |
End bp | 7455872 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640561790 |
Product | putative autoinducer (acylhomoserine lactone) synthase |
Protein accession | YP_001242901 |
Protein GI | 148258316 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.983538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.575549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGAGA TTCATGTCGT TCGCAGAGAT AATCGCGCGC TCTACGAGAA ATACTTTGAT CCATACTACC GGCTGCGTCA CGAGATCTAT GTCAAGCAAC GCAAATGGAT GGCGCTCGAT CGTCCGGACG GGCGCGAGAT CGATCAATTC GACACCGAAG ATTCGGTCTA TCTGTTCTGT ATCGACAAGG GCCAACTGAT CGGCTCGATG CGCGCGGTGC CGACAATGGT GCCGACGCTG ATGAGCGACA TCTTTCCCTA TCTCAATCTG CGCGGACCGA TCCAGCGCCC GGACGTCTAT GAGCTGTCGC GCATCTTTGT CATCCCCGAA CGCCGTGGCG AGCATGCCGG CCCACGGATT GATCTGCTGC TGCTCACCGC GATCATGGAA TATGGCATCT CGATCGGGCT GACCGGTTTT TCGATCGTCC TCGAAACCTG GTGGCTGCCC CGCTTCGAAA AATGCGGCTG GAAGGCGAAG CCCTTGGGAG TGCCGCATAT GATGGACGGC ATGGCCGTCA TGGCCGTCCT TGTCGATTGC GATGAGAGCA CCTGGAAGTC GCTGTGCAGC CAGATCGGCC TCACCCGTCC GACCCTGACC TGGCAGGGAC TCGAAGGCGT CAGCCGCCAG GCCCTGCCGG ATATCTTTCT TCATCTTCCG CCAGCCTTTC AGCCAGCGCA ATGA
|
Protein sequence | MPEIHVVRRD NRALYEKYFD PYYRLRHEIY VKQRKWMALD RPDGREIDQF DTEDSVYLFC IDKGQLIGSM RAVPTMVPTL MSDIFPYLNL RGPIQRPDVY ELSRIFVIPE RRGEHAGPRI DLLLLTAIME YGISIGLTGF SIVLETWWLP RFEKCGWKAK PLGVPHMMDG MAVMAVLVDC DESTWKSLCS QIGLTRPTLT WQGLEGVSRQ ALPDIFLHLP PAFQPAQ
|
| |