| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7112 |
|---|
| Symbol | |
|---|
| ID | 5153764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7454379 |
|---|
| End bp | 7455107 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640561789 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001242900 |
|---|
| Protein GI | 148258315 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0985225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.773577 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATAGATG CATATTGGGG GCGACGTGCT CTGGACTATG TCGATGCGAT CGAAGCATCG
AAGACCAGCG CAAGCGTGCT CTCCCAATTC GAGAAGATGA TCGGCGACCT GGGTTTCCAC
GCTTACATCA TGGCCGGCGT GCCGGCCCCC GGGCAGTCGC TGCAGCATAC GATCCTGGCC
AATGGCTGGC CGAGCGAATG GTTCGACCTG TATGCCCGAG AGCAGTTCCA CCGCTACGAT
CCTATACCGC GGCACTGCCT CTCGACTCTG AATCCATTCG CATGGTCGGA AGCGCCCTAT
GACCGCAACG ATGAGCCGGG GGCGCATGAG GTGATGACGC GTGCGCGCGA CTTCCGATTG
AACGAAGGCT TCTGCGTGCC CATCCACTAT GACGATGCGG TTGGCGCGGT CAGCCTTGCG
GGCGAGCGGC CCAATCTCGC GCCGGACGCC CGAGGCGCGC TCCACCTGAT CAGCATCTTT
ACCCATTCGA GGCTCCGCGC CCTCGCGCGT GCAACGTCGG GGGGGCAGAG CCGGCGCCTG
TCAAGGATCG AAGCCGAAGT GCTGAGCTGG GCAGCGCGTG GCAAGACAGC GTGGGAAACC
GCACGCATCC TCGGTGTGTC GGAGCGGAAC GTTCGCTGGC ATCTCGAAGA AGCCCAGCGC
AAGCTGGAGA CCAAGAACAA GACGGCGACT GTTGCGACCG CCCTTGTCAA CGGCGAGATC
ACGATCTGA
|
|---|
| Protein sequence | MIDAYWGRRA LDYVDAIEAS KTSASVLSQF EKMIGDLGFH AYIMAGVPAP GQSLQHTILA
NGWPSEWFDL YAREQFHRYD PIPRHCLSTL NPFAWSEAPY DRNDEPGAHE VMTRARDFRL
NEGFCVPIHY DDAVGAVSLA GERPNLAPDA RGALHLISIF THSRLRALAR ATSGGQSRRL
SRIEAEVLSW AARGKTAWET ARILGVSERN VRWHLEEAQR KLETKNKTAT VATALVNGEI
TI
|
|---|
| |