Gene BBta_7085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7085 
Symbol 
ID5152892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7430734 
End bp7431759 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID640561763 
ProductABC transporter, permease protein 
Protein accessionYP_001242874 
Protein GI148258289 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGTTCC TGTTGCAGGA CGGCATTACC AACGGCGCGA TCTATGCCCT GCTTGGGCTG 
GCGCTGGTGC TGGTATTTGC CGTCACCCGG GTGATCCTGA TCCCGCAGGG CGAATTCGTC
ACCTATGGCG CGCTCACTTA CGCCTCGCTC GCCGCCGGCC GCATGCCGGG CACGGCGAAG
CTTGCCGTGG TGATGGGCCT CATCGCGTTT GCCTTCGACC TCTATGCGAT GCGCAAGACG
CTGCACGTGC CGAAGATCGC GCGAACGTTC GGCCTCAACA TGGTCTTTCC GGTGATCGTT
CTGCTGGCCA GCCTATGGGC CGCTGACCAG CGCATGCCGG CGGGCGTCAG CCTGGTGCTG
TCGCTGCTGA TCGTGGCCAG CATCGGTCTG TCGCTGTACC GCATCGTGTT CCAGCCGCTC
GCCCACACCT CGGTGCTGGT GCTGCTGATC GCCTCGGTCG GCGTGCATCT GGCGCTGCAG
GGCCTGGGCC TGCTGTTCTT CGGCGCCGAG GGCCAGCGAG GCCCGACCCT GCTCACCGCC
AGCGCGACGC TCGGCTCGCT GCGCTTCACC GGCCAGGGCA TGGCGGTCTA CGGCATCACC
ATCGCCTTCA TCGTCGGCCT CTGGCTGTTC TTCGGCCTGA CCCTGTACGG CAAGGCGCTG
CGCGCCACCG CCGTCAACCG GCTCGGCGCC CGTCTCGTCG GCATCCGCAC CACGCTGTCC
GGCCAGATCG CCTTCCTGCT GGCCTCCACG ATCGGCGCGC TCTCCGGCAT CCTGATCGTC
CCGATCACGA CGCTCTATTA CGACACCGGC TTCCTGATCG GCCTGAAGGG TTTCATCGCC
GCGATCATCG GCGGCCTGAT CAGCTACCCC CTGACCGCTG TGGCTGCCCT TGTCGTCGGC
ATCGTCGAGG CGTTCTCCTC GTTCTACGCC TCGAACTTCA AGGAAGTGAT CGTCTTCACG
CTGCTGATCC CGGTCCTGCT GCTGCGTTCG CTCGCCGCGC CCGCGGTCGA AGAAGAGAAG
GATTGA
 
Protein sequence
MLFLLQDGIT NGAIYALLGL ALVLVFAVTR VILIPQGEFV TYGALTYASL AAGRMPGTAK 
LAVVMGLIAF AFDLYAMRKT LHVPKIARTF GLNMVFPVIV LLASLWAADQ RMPAGVSLVL
SLLIVASIGL SLYRIVFQPL AHTSVLVLLI ASVGVHLALQ GLGLLFFGAE GQRGPTLLTA
SATLGSLRFT GQGMAVYGIT IAFIVGLWLF FGLTLYGKAL RATAVNRLGA RLVGIRTTLS
GQIAFLLAST IGALSGILIV PITTLYYDTG FLIGLKGFIA AIIGGLISYP LTAVAALVVG
IVEAFSSFYA SNFKEVIVFT LLIPVLLLRS LAAPAVEEEK D