| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7074 |
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| Symbol | pimF |
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| ID | 5151885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7417759 |
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| End bp | 7419852 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561752 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase |
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| Protein accession | YP_001242863 |
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| Protein GI | 148258278 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.663612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAG TGGCAAAGCT TGATCGTCAT GATATCGTCG GCATCGTCAC CATCGACAGT
CCGCCCGTCA ATGCGCTGAG TGCCGCAGTT CGCGGTGGTA TCCTGGACAA CGTCAAAGCG
GCCATTGCTG ATCCCGAGAT CAAGGTCATC GTTCTGACCT GTGGCGGGCG CACCTTCATC
GCCGGCGCCG ACATCACCGA GTTCGGCAAG CCGCCGAAGC CGCCGGCGCT CAACGACGTG
CTGAGCACGA TCGAGAACAG CCCGAAGCCG GTGATCGCCG CTATTCATGG AACGGCGCTG
GGCGGTGGTC TCGAGGTGGC GCTCGCCTGT CATTATCGTG TCGCCACCAA GGACGCGAAG
CTCGGCCTGC CCGAGGTGAA GCTCGGTCTG CTGCCGGGGG CGGGCGGAAC GCAGCGCCTG
CCGCGGGCCG TCGGTCCGGA ACTCGCCGTG AAGATGATCG TCGGTGGTGA TCCGATCGGT
GCCGCGGAGG CGCACAAGGC GGGGCTGATC GAGGAGATCG TCGAGGGGCC CGCGTCAGGG
GCCGAAGCCT TTGCGCGCAA GGTGGTGGCG GAGAACCGTC CGCTGCGCAA GCTGCGCGAC
GATGATTCCA AGCTGGCGGC GGCCAAGGCG GACCGTTCGA TCTTCACCAA TGCGGTCGCG
GCGATCACCA AGAAGTCGCG CGGCCTAGAA GCGCCGTTCG CCGCGGCCGA TGCCGTCGGC
TATGCGATCG ACCTGCCGTT CGACGAGGGC CTGAAGCGGG AGCGGGAGGG CTTCCTCAAG
CTCCTCACCA GCGACCAGTC CAAGGCGCAG CGCTATGCCT TCTTCGCCGA GCGCGAGGCT
GCCAAGATTG CCGGCGTGCC CGAGGGCACC AAGGGCCGCA AGGTCGATCG CGTCGCGATC
ATCGGCGCTG GCACGATGGG CGGCGGTATC GCGATGTCGT TTGCCAATGC CGGCATCCCG
GTGACCTTGA TCGAGACGGC CGAGGAACAG CTCAAGCGCG GCATGGGCGT CATGCAGAAG
AACTGGGAGG CGACCGCCGC GCGCGGCGGC ATCCCGGCGG ATGCGCCGGC CAAGCGCATG
GCGCTGATCG ACGGCAAGGT CGGGCTCGAG CACGTCAAGG ATGCCGACCT CGTCATTGAG
GCCGTGTTCG AGACCATGGC GGTGAAGAAG GAAGTGTTCG GCAAGCTCGA TCAATACGCC
AAGCCCGGCG CGGTGCTCGC GTCCAACACC TCCTACCTGA ACATCGACGC CATCGCCGCA
GAGACCAGCC GTCCGCAGGA CGTGCTCGGC ATGCACTTCT TCTCGCCGGC GAACGTGATG
AAGCTGTGCG AGATCGTCCG CGCCGAGAAG ACGGCGCCGG ATGCGCTGGT GACCGCCGTG
TCGATCGCGC GCAAGATCGC CAAGGTGCCG GCGGTGGTCG GCGTCTGCGA CGGTTTCGTC
GGCAACCGCA TGCTGGCGCA GCGTGGCAAG CAGGCCGAGA AGCTGCTGTT CGAAGGCGCG
CTGCCGCAGC AGGTCGACGC CGTCGTCACC AAGTTCGGCA TGCCGATGGG CCCGTTCGCG
ATGGGCGATC TCGCCGGCCT CGACATCGGC TGGCGCTCGC GCAAGGACCG CGGCATCAAG
AGCGAAATCG CGGACGCGCT GTGCGAAGCC GGCCGTTTCG GCCAGAAGAC CGGCAAGGGC
TACTACAAAT ATGAGGCCGG CTCGCGCGCG CCGTTGCCGG ATCCCGACGT CGAAAAGCTG
ATCGACGAGA CGCTCGCCAA GCTCGGCCTC AAGCGCCGCG CAGTCAGCGA CGAGGAGATC
CTCGAGCGCA TGATGTATCC GATGATCAAT GAGGGCGCGA AAATCCTCGC CGAGGGGATC
GCCGCGCGTC CGTCGGACAT CGATGTCGTC TGGCTGTACG GCTATGGCTG GCCGATCTAT
CGCGGCGGCC CGATGTACTG GGCGGACAGC GTCGGCCTGA AGCATATCGC CGAGCGCCTC
GCCTTCTATG CCAAGGAGAC GAACGATCCG TCGCTGGAGC CGGCGCCGCT GCTCAAGAAG
CTCGCTGACG AGGGCAAGAC GTTCGCGTCG CTGGCCCAGG GGAAGGCCGC TTGA
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| Protein sequence | MSEVAKLDRH DIVGIVTIDS PPVNALSAAV RGGILDNVKA AIADPEIKVI VLTCGGRTFI
AGADITEFGK PPKPPALNDV LSTIENSPKP VIAAIHGTAL GGGLEVALAC HYRVATKDAK
LGLPEVKLGL LPGAGGTQRL PRAVGPELAV KMIVGGDPIG AAEAHKAGLI EEIVEGPASG
AEAFARKVVA ENRPLRKLRD DDSKLAAAKA DRSIFTNAVA AITKKSRGLE APFAAADAVG
YAIDLPFDEG LKREREGFLK LLTSDQSKAQ RYAFFAEREA AKIAGVPEGT KGRKVDRVAI
IGAGTMGGGI AMSFANAGIP VTLIETAEEQ LKRGMGVMQK NWEATAARGG IPADAPAKRM
ALIDGKVGLE HVKDADLVIE AVFETMAVKK EVFGKLDQYA KPGAVLASNT SYLNIDAIAA
ETSRPQDVLG MHFFSPANVM KLCEIVRAEK TAPDALVTAV SIARKIAKVP AVVGVCDGFV
GNRMLAQRGK QAEKLLFEGA LPQQVDAVVT KFGMPMGPFA MGDLAGLDIG WRSRKDRGIK
SEIADALCEA GRFGQKTGKG YYKYEAGSRA PLPDPDVEKL IDETLAKLGL KRRAVSDEEI
LERMMYPMIN EGAKILAEGI AARPSDIDVV WLYGYGWPIY RGGPMYWADS VGLKHIAERL
AFYAKETNDP SLEPAPLLKK LADEGKTFAS LAQGKAA
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