| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7070 |
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| Symbol | |
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| ID | 5151355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7412027 |
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| End bp | 7413169 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561748 |
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| Product | putative pimeloyl-CoA dehydrogenase pimD (small subunit) |
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| Protein accession | YP_001242859 |
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| Protein GI | 148258274 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03203] pimeloyl-CoA dehydrogenase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.562071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.731705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTG ATCTTACCGA GGAGCAGCGC CTCCTCAAGG ACAGCATCGA CGGCCTCTTG
GCGGATGCCT ATGACTTCGA CAAGCGCAAG CTGTACATGA AGGAGAAGGG CGGCTGGAGC
AAAGCGATCT GGTCCAAGCT CGCCGAGCAG GGCCTGCTCG GCCTGCCGTT CTCCGAGGAA
GACGGCGGCT TCGGCGCCGG CGGCGTCGAG ACCATGATCG TGATGGAGGC GATGGGGCGC
GCGCTCGTGC TCGAGCCGTA TCTCGCGACC GTGGTGCTCG CCGGCGGATT CCTGCGCCAT
GGCGGCTCGG CGGCGCAGAA GGCCGCGCAT CTGCCGGGCA TCATCGACGG CAGCAAGACC
TTCGCCTTCG CCCAGCTCGA GAAGCAGTCG CGCTACGACC TGTTCGACGT TGCGACGTCG
GCGAAGAAGA AGGGCGATGG CTATGTCATC GACGGCGAGA AGTTCGTCGT GCTCAATGGC
GAGAATGCCG ACACCCTGAT CGTGACCGCG CGCACCGCTG GTGGCCAGCG CGACAAGAGC
GGCATCGGCG TGTTCATCGT GCCGGCCGGC GCCAAGGGCG TCACCCGCAA GGGCTATCCG
ACCCAGGACG GCCTGCACGC CGCCGACATC AGCTTCACCG GCGTCGAGGT CGGTGCTGAT
AGCGTGATCG GCGACCCGGC GAACGGCCTG CCGCTGATCG AGCGCGTCGT CGACGAGGCC
CGCATCGCAT TGTGCGCGGA GGCCGTCGGC CTGATGGACG AGTCGCTCAA GACCACGGTC
GAGCACATCA AGACGCGCAA GCAGTTCGGT GTCGCGATCG GCTCGTTCCA GTCGCTGCAG
CACCGCGCCT CCGACATGTT CGTGGCGCTG GAGCAGGCGC GCTCGATGTC GATGTTCGCG
ACCATGGCCG CCGAATTCGA CGACGCCAAG GAGCGCGCGA CCTCGATCGC CGCGGCGAAG
GTGCAGATCG GCAAGTCCGG CAAGTTTGTC GGCCAGCAGT CGATCCAGCT CCATGGCGGC
ATCGGCATGA CCATGGAGGC CAAGATCGGC CACTACTTCA AGCGCCTGAC GATGATCGAG
ACCACCTTCG GCGACACCGA CTACCACATG CGCCGCGTCA GCGAGGCGGG TGGGTTGATC
TAG
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| Protein sequence | MDFDLTEEQR LLKDSIDGLL ADAYDFDKRK LYMKEKGGWS KAIWSKLAEQ GLLGLPFSEE
DGGFGAGGVE TMIVMEAMGR ALVLEPYLAT VVLAGGFLRH GGSAAQKAAH LPGIIDGSKT
FAFAQLEKQS RYDLFDVATS AKKKGDGYVI DGEKFVVLNG ENADTLIVTA RTAGGQRDKS
GIGVFIVPAG AKGVTRKGYP TQDGLHAADI SFTGVEVGAD SVIGDPANGL PLIERVVDEA
RIALCAEAVG LMDESLKTTV EHIKTRKQFG VAIGSFQSLQ HRASDMFVAL EQARSMSMFA
TMAAEFDDAK ERATSIAAAK VQIGKSGKFV GQQSIQLHGG IGMTMEAKIG HYFKRLTMIE
TTFGDTDYHM RRVSEAGGLI
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