Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7062 |
Symbol | |
ID | 5152012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7403196 |
End bp | 7404329 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561740 |
Product | putative ABC transporter, permease protein |
Protein accession | YP_001242851 |
Protein GI | 148258266 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR01185] DevC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.549141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTGC AGTTCAGGCT TGCGTCGCGA AACCTGTTTC ATGACAGGCT GCGCTTCATC GCCACCATCA TCGGCATCAT CTTCTCGATC GTGCTGGTGA CCGTGCAGAT GGGCCTCTAT GTCGGCTTCC GCCTGATGGT CACGACCATG ATCGACCACG CGCCGGCCGA GCTCTGGATC ATGCCGGTCG GCACCAAATG TTTCGAAGAC CCCTCGCTGC TCGACGAGCG GCAGCGGTTC CGGGCGCTGG CGGTTCCGGG CGTCGCCGAG GCCACGCCGC TGGTGATCGG CTACGCGCAA TGGCGGCTGC CGCAGGGCAC CACGACGCCG GTGTTCGTGG TCGGCTCGGA ATTGCGCGGG CTCGGGCTGC ATCCCTGGAA CGTGGTCGAG GGCCGGCTCG ACGACCTCTC GGTGCCCGGC GCCGTCGCGA TCGACCAGAC CTATTTCGAG CGGCTCGGCA TCACCGGCGT CGAGCAGGCC GCCGAGCTGC GCGATCGCAA GGTGCAGGTG ATGGCGGTCA CCAAAGGCAT CCGCTCGTTC ACGACCACGC CTTACGTGTT CACCGATGTC GAGCGTGCAC GCAGCTTTAC CGGCATTGCA CCGAACAAGG CGTCCTATCT GCTGGTGAAG CTCGCGCCGG GGGCGGACCT CTGGACCGTG CAGCAGGCGG TGCGCGCCAA TCTGGCCGAT GTCGAGGTGC TGACGGCCGC CGAGTTCGCC AGCCGCAGCC GCTCATTCTG GCTGTTCGGC ACCGGTGCGG GCGCGGCGCT GTTCGCGGGC GCGTTGCTCG GCCTCATCGT CGGCACCGTG ATCGTGGCAC AGACACTGTA TTCCAGCACC AAGGATCACA TCAACGAGTT CGCCACGCTG CGCGCGATCG GCTCGACCAG CCGCTACATC TACACGGTGA TCATCTGGCA GGCGCTGCTC AGCGCCATTG TCGGCTTCGC CGGCGCCGCC GCGATCGGCA AGATCGTCGC GGCCGCGACC GCGGAATCGG CGCTGCCGGT GATCATGACG CCGCTGCTGA CGGTCGCGCT GTTCGTCCTG ACATTGACGA TGTGCATCGG CTCGGCGATT GCGGCGATCG TGAAGGTGAT GCGGATCGAC CCGACCTTGG TGTTCTCGCG ATGA
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Protein sequence | MSLQFRLASR NLFHDRLRFI ATIIGIIFSI VLVTVQMGLY VGFRLMVTTM IDHAPAELWI MPVGTKCFED PSLLDERQRF RALAVPGVAE ATPLVIGYAQ WRLPQGTTTP VFVVGSELRG LGLHPWNVVE GRLDDLSVPG AVAIDQTYFE RLGITGVEQA AELRDRKVQV MAVTKGIRSF TTTPYVFTDV ERARSFTGIA PNKASYLLVK LAPGADLWTV QQAVRANLAD VEVLTAAEFA SRSRSFWLFG TGAGAALFAG ALLGLIVGTV IVAQTLYSST KDHINEFATL RAIGSTSRYI YTVIIWQALL SAIVGFAGAA AIGKIVAAAT AESALPVIMT PLLTVALFVL TLTMCIGSAI AAIVKVMRID PTLVFSR
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