Gene BBta_7062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7062 
Symbol 
ID5152012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7403196 
End bp7404329 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID640561740 
Productputative ABC transporter, permease protein 
Protein accessionYP_001242851 
Protein GI148258266 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID[TIGR01185] DevC protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.549141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGC AGTTCAGGCT TGCGTCGCGA AACCTGTTTC ATGACAGGCT GCGCTTCATC 
GCCACCATCA TCGGCATCAT CTTCTCGATC GTGCTGGTGA CCGTGCAGAT GGGCCTCTAT
GTCGGCTTCC GCCTGATGGT CACGACCATG ATCGACCACG CGCCGGCCGA GCTCTGGATC
ATGCCGGTCG GCACCAAATG TTTCGAAGAC CCCTCGCTGC TCGACGAGCG GCAGCGGTTC
CGGGCGCTGG CGGTTCCGGG CGTCGCCGAG GCCACGCCGC TGGTGATCGG CTACGCGCAA
TGGCGGCTGC CGCAGGGCAC CACGACGCCG GTGTTCGTGG TCGGCTCGGA ATTGCGCGGG
CTCGGGCTGC ATCCCTGGAA CGTGGTCGAG GGCCGGCTCG ACGACCTCTC GGTGCCCGGC
GCCGTCGCGA TCGACCAGAC CTATTTCGAG CGGCTCGGCA TCACCGGCGT CGAGCAGGCC
GCCGAGCTGC GCGATCGCAA GGTGCAGGTG ATGGCGGTCA CCAAAGGCAT CCGCTCGTTC
ACGACCACGC CTTACGTGTT CACCGATGTC GAGCGTGCAC GCAGCTTTAC CGGCATTGCA
CCGAACAAGG CGTCCTATCT GCTGGTGAAG CTCGCGCCGG GGGCGGACCT CTGGACCGTG
CAGCAGGCGG TGCGCGCCAA TCTGGCCGAT GTCGAGGTGC TGACGGCCGC CGAGTTCGCC
AGCCGCAGCC GCTCATTCTG GCTGTTCGGC ACCGGTGCGG GCGCGGCGCT GTTCGCGGGC
GCGTTGCTCG GCCTCATCGT CGGCACCGTG ATCGTGGCAC AGACACTGTA TTCCAGCACC
AAGGATCACA TCAACGAGTT CGCCACGCTG CGCGCGATCG GCTCGACCAG CCGCTACATC
TACACGGTGA TCATCTGGCA GGCGCTGCTC AGCGCCATTG TCGGCTTCGC CGGCGCCGCC
GCGATCGGCA AGATCGTCGC GGCCGCGACC GCGGAATCGG CGCTGCCGGT GATCATGACG
CCGCTGCTGA CGGTCGCGCT GTTCGTCCTG ACATTGACGA TGTGCATCGG CTCGGCGATT
GCGGCGATCG TGAAGGTGAT GCGGATCGAC CCGACCTTGG TGTTCTCGCG ATGA
 
Protein sequence
MSLQFRLASR NLFHDRLRFI ATIIGIIFSI VLVTVQMGLY VGFRLMVTTM IDHAPAELWI 
MPVGTKCFED PSLLDERQRF RALAVPGVAE ATPLVIGYAQ WRLPQGTTTP VFVVGSELRG
LGLHPWNVVE GRLDDLSVPG AVAIDQTYFE RLGITGVEQA AELRDRKVQV MAVTKGIRSF
TTTPYVFTDV ERARSFTGIA PNKASYLLVK LAPGADLWTV QQAVRANLAD VEVLTAAEFA
SRSRSFWLFG TGAGAALFAG ALLGLIVGTV IVAQTLYSST KDHINEFATL RAIGSTSRYI
YTVIIWQALL SAIVGFAGAA AIGKIVAAAT AESALPVIMT PLLTVALFVL TLTMCIGSAI
AAIVKVMRID PTLVFSR