| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7061 |
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| Symbol | metH |
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| ID | 5152011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7399011 |
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| End bp | 7402874 |
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| Gene Length | 3864 bp |
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| Protein Length | 1287 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640561739 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001242850 |
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| Protein GI | 148258265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC CCGTCTCGCC CGCGCGTACC GCCTTTCTCA CGGCTGCCCG TGAGCGCATC
CTGATTCTCG ACGGCGCCAT GGGCACGATG ATCCAGGCGC TGCAGTTCGA CGAGGCCGCG
TTCCGCAGTG AGCGGTTCAA GGACTTCCAT CGCGACCTCC GTGGCAACAA CGACCTCTTG
ATCCTCACCC AGCCCGAGGC GATCGAGGAC ATCCACGCGC AATACCTGCG CGCCGGCGCC
GACATCGTCG CCACCAACAC GTTCTCCGCG ACGTCGATCG CACAGGCCGA TTACGATCTC
TCCGACATCA TCTACGAGCT CAACCGCGAA GGCGCCCGGC TCGCGCGCAA TGCCGCGACC
CGTGTCGCCG CCGAGGACGG CAAACAGCGC TTCGTCGCCG GCGCGATGGG CCCGACCAAC
CGCACCGCCT CGATCTCGCC TGATGTCTCC AACCCCGGCT ACCGTGCCGT CACGTTCGAC
GACTTGCGCA TTGCCTATGG CGAGCAGGCG CGCGGGCTGC TCGACGGCGG CGCCGACCTG
CTGCTGGTCG AAACCATCTT CGACACGCTG AACGCCAAGG CGGCGCTGTA CGCGATCGCC
GAGCTGTGCG AGGCGCGCGG CATCGACGTG CCCGTGATGA TCTCGGGCAC CATCACCGAC
AAGTCCGGCC GCCTGCTGTC GGGCCAGATG CCCGAGGCGT TCTGGAATTC GGTGCGTCAC
GCCAAGCCGC TGACCATCGG CTTCAACTGC GCGCTCGGCG CCGAGGATCT GCGCGCCCAT
GTCGCCGACA TCGGCCGCGT CGCCGATACC TTGGTCTGCG CCTATCCGAA TGCCGGCCTG
CCCAACGAGT TCGGCCAGTA TGACGAGACG CCGGCCTACA TGGCGCGGCT GATCGGCGAG
TTCGCCCGCG ACGGCCTCGT CAACATCGTC GGCGGCTGCT GCGGCACCAC GCCGGACCAT
ATCGCGGCGA TCGCCGCCGC GGTCGCCCCG CACAAGCCGC GCGCCGTGCC TGAGATCGCG
CCGCGGCTGC GGCTGTCGGG CCTGGAGCCG TTCGAGCTGA CGCCGGAGAT TCCGTTCGTC
AATGTCGGCG AGCGCACCAA CGTCACGGGT TCTGCCAAAT TCCGCAAGCT GATCACCGCC
GGCGACTACA CCGCGGCGCT GCAGGTGGCG CGCGACCAGG TCGAGAACGG CGCCCAGGTC
ATCGACGTCA ACATGGACGA GGGCCTGCTG GACTCGGAAG CCGCGATGCG GACCTTCCTC
AACCTCGTCG CCGCCGAGCC GGATATCGCC CGCGTTCCGG TGATGGTCGA TTCCTCGAAG
TTCCACGTCA TCGAGGCCGG CCTGAAATGC GTTCAAGGCA AGCCAGTCGT GAACTCGATC
TCGCTCAAGG AGGGCGAGGA GAAGTTCATC CACGAGGCCA AGATCGCGCG CCGCCACGGC
GCCGCCGTGG TCGTGATGGC GTTCGACGAG ACCGGCCAGG CCGACACCTA CAAGCGCAAG
ACCGAGATCT GCGCCCGCGC CTACAAGATC CTGGTCGAGC AGATCGGCTT CCCGCCCGAG
GACATCATCT TCGACCCGAA CATCTTCGCG ATCGCCACCG GCATCGAGGA GCATAACAAT
TACGGCGTCG ACTTCATCGA GGCGACACGC TGGATTCGCT CGAACCTGCC GCATGCGCAT
GTCTCGGGCG GCGTCTCCAA TCTCTCGTTC TCGTTCCGCG GCAATGAGCC GGTGCGCGAG
GCGATGCATT CGGTGTTCCT GTATCACGCC ATCAAGGCCG GCATGGACAT GGGCATCGTC
AATGCCGGTC AGATGATCGT CTATGACGAC ATCGATCCCG AGCTGCGCCA GGTGTGCGAG
GACGTCGTGC TCAACCGCGA CCCCGGCGCC TCGGAGCGGC TGCTCGCACT CGCCGAAAAG
TTCCGCGGCC AGGGCAAGCA GACCAAGGAG GCCGATCTCG CCTGGCGCGA CTGGCCGGTC
GACAAGCGCC TGTCCCACGC GCTGGTGCAT GGCATCACCG AGTTCATCGA AGTCGACACC
GAAGAGGCGC GCGCCGCGTC GACGCGGCCG CTCGACGTCA TCGAAGGCCC GCTGATGGCC
GGCATGAACG TGGTCGGCGA TCTCTTCGGC GACGGCAAGA TGTTCCTGCC GCAGGTCGTG
AAATCGGCAC GCGTGATGAA GCAGGCGGTG GCCTATCTGA TGCCGTTCAT GGAGGCCGAG
AAGGCCGCCA ACAAGGGCCG TGCCAATGAG CGCTCCAACG CCGGCAAGAT CGTGCTCGCG
ACCGTCAAGG GCGACGTCCA CGACATCGGC AAGAACATCG TCGGCATCGT GCTCCAGTGC
AACAATTTCG AGGTCATCGA CCTCGGCGTC ATGGTGCCCG CCGCCAAGAT CATCGAGACG
GCGAAGACCG AGAATGCCGA CATCATCGGC CTCTCCGGCC TGATCACGCC GTCGCTCGAC
GAGATGGCCT ATCTGGCCTC CGAGATGGAG CGCCAGGGCC TCAACATGCC GCTCCTGATC
GGCGGCGCGA CGACGAGCCG CGTCCACACC GCCGTCAAGA TCGACCCGAA CTACCAAAGC
GGCCCGGTGG TGCATGTCAA CGACGCCAGC CGCGCCGTCG GCGTCGCCTC CTCGCTGCTG
TCGGCGGAGC GCAAGGATGC CTATGCCGCC GAGATCCGGA CCGAATATCA GAAGATCGCC
GCCGCCCATC TGCGCGGCCA GGCCGACAAG AAGCGGCTGA AGCTTTCCGA CGCCCGCGCC
AACGCGCCGA AGATCGATTT CGCCAAAGCG AGGCCGGTCA AGCCGACCTT CCTCGGCGTC
AAGACCTTCG CCGACTACGA CCTCGCCGAG CTCGTGCCCT ATATCGACTG GACGCCGTTC
TTCCAGACCT GGGAGCTCGC CGGCCGCTTC CCGGCCATCC TCGACGACGC CAAGGTCGGC
GAGGCCGCGC GCGCGCTCTA TGATGACGCG CTCAAGATGC TGAAGCGCAT CGTCGACGAG
AAGTGGTTCA CCGCGCGCGC CGCGATCGGC TTCTGGCCGG CCAATGCCGA AGGCGACGAC
ATCGTGCTCT ATGCCGATGA CAGCCGCACC GAGCGGATTG CGACGCTGCA TACGCTGCGC
CAGCAGCTCG AAAAGCGCGA GGGCCGCTTC AACACCGCCC TGTCCGACTT CGTCGCGCCC
GTGGGTTCGA GCGTGCCGGA CTATGTCGGC GGCTTCGTGG TCACCGCCGG CCTCGGCGAG
GACGCGGTGG CCGACCGCTT CAAGAACGCC AATGACGACT ACTCCTCGAT CCTGGTGAAG
GCGCTGGCCG ATCGTCTGGC CGAGGCGTTC GCCGAGCGGC TGCATGCCCG CGTCCGCCGC
GAGTTCTGGG CCTATGCCCC AGACGAGGCG CTCTCGCCCG ACGACCTGAT CCTGGAGAAG
TACCAGGGCA TCCGTCCCGC ACCGGGCTAT CCGGCGCAGC CCGATCACAC CGAAAAGGCG
ACGCTGTTCG AACTGCTGGA TGCCGAAAAC AACGCCGGCG TCCGCCTGAC CGAGAGTTTT
GCGATGTGGC CGGGCTCGTC GGTCTCGGGC CTGTATTTCG CCTCGCCGGA GAGCTTCTAT
TTCGGCGTCG GCAAGATCGA GCGCGACCAG GTCGAGGACT ACGCCACGCG CAAGGGCATG
ACGGTCGCCG AAGTCGAACG CTGGCTGGCG CCGATCCTGA ACTACATCCC GGCCCGCGGC
GGCCAGGAGG CCGAGACATC GCGCGCCACG ACAGCGCCCG CTCCGGCCAA CGACACCGCC
CCCGCCGAAC TCGCCGGCCA CCCGCCCGGC TGCACCTGCG CGGTGCATCT CGCCTGGCGT
AAGAAGGCCG TCGGCGCGAA ATAG
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| Protein sequence | MSAPVSPART AFLTAARERI LILDGAMGTM IQALQFDEAA FRSERFKDFH RDLRGNNDLL
ILTQPEAIED IHAQYLRAGA DIVATNTFSA TSIAQADYDL SDIIYELNRE GARLARNAAT
RVAAEDGKQR FVAGAMGPTN RTASISPDVS NPGYRAVTFD DLRIAYGEQA RGLLDGGADL
LLVETIFDTL NAKAALYAIA ELCEARGIDV PVMISGTITD KSGRLLSGQM PEAFWNSVRH
AKPLTIGFNC ALGAEDLRAH VADIGRVADT LVCAYPNAGL PNEFGQYDET PAYMARLIGE
FARDGLVNIV GGCCGTTPDH IAAIAAAVAP HKPRAVPEIA PRLRLSGLEP FELTPEIPFV
NVGERTNVTG SAKFRKLITA GDYTAALQVA RDQVENGAQV IDVNMDEGLL DSEAAMRTFL
NLVAAEPDIA RVPVMVDSSK FHVIEAGLKC VQGKPVVNSI SLKEGEEKFI HEAKIARRHG
AAVVVMAFDE TGQADTYKRK TEICARAYKI LVEQIGFPPE DIIFDPNIFA IATGIEEHNN
YGVDFIEATR WIRSNLPHAH VSGGVSNLSF SFRGNEPVRE AMHSVFLYHA IKAGMDMGIV
NAGQMIVYDD IDPELRQVCE DVVLNRDPGA SERLLALAEK FRGQGKQTKE ADLAWRDWPV
DKRLSHALVH GITEFIEVDT EEARAASTRP LDVIEGPLMA GMNVVGDLFG DGKMFLPQVV
KSARVMKQAV AYLMPFMEAE KAANKGRANE RSNAGKIVLA TVKGDVHDIG KNIVGIVLQC
NNFEVIDLGV MVPAAKIIET AKTENADIIG LSGLITPSLD EMAYLASEME RQGLNMPLLI
GGATTSRVHT AVKIDPNYQS GPVVHVNDAS RAVGVASSLL SAERKDAYAA EIRTEYQKIA
AAHLRGQADK KRLKLSDARA NAPKIDFAKA RPVKPTFLGV KTFADYDLAE LVPYIDWTPF
FQTWELAGRF PAILDDAKVG EAARALYDDA LKMLKRIVDE KWFTARAAIG FWPANAEGDD
IVLYADDSRT ERIATLHTLR QQLEKREGRF NTALSDFVAP VGSSVPDYVG GFVVTAGLGE
DAVADRFKNA NDDYSSILVK ALADRLAEAF AERLHARVRR EFWAYAPDEA LSPDDLILEK
YQGIRPAPGY PAQPDHTEKA TLFELLDAEN NAGVRLTESF AMWPGSSVSG LYFASPESFY
FGVGKIERDQ VEDYATRKGM TVAEVERWLA PILNYIPARG GQEAETSRAT TAPAPANDTA
PAELAGHPPG CTCAVHLAWR KKAVGAK
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