| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7048 |
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| Symbol | |
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| ID | 5152132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7381813 |
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| End bp | 7383729 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640561726 |
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| Product | putative O-antigen export system permease protein |
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| Protein accession | YP_001242837 |
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| Protein GI | 148258252 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase
[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAG CTCCTGCCTC TTCGCGCCGC TTCTCGGTGC TTCACGTCTT CAAGGTCTTC
TATCCCGACC TGTTCGGCGG CACGCTCACG GTGATCCGCG ACATCTGCGC CGGCCTGGCG
CACGCCGTCG CGTCGTCGGT GCTGGTCTGC TCGGACGCGC CGCGGCCCCG CCACGAGATC
GTGAACGGCA TTCCGGTCGA GCGCGTGCGC TCGCTCGGAA ACCTGTTCTC GCTGCCGATT
GCGCCGACCT ATCCGTTCCG GCTGTGGCGC CGCATTGCCG CGTACGATCT GGTCGCGCTG
CATGCGCCGT TTCCGCTGGC CGATCTCGTA TTCGCCTGCG GTCTCGGGCG GGCGCGTCCG
CTGGTCGTGC ACTGGCATGC CGACATCGTG TCGCATGGCC GGCTGCGCTG GCTGGTCGAG
CCGCTGATGC GGCGAACGTT GCAGCGCGCG GAGGCGATCA TCGTCTCCGA TGCCGCGCTC
GCGACGCGGA CCGCGCTGCT GCGCGACGTC GCCAACAAGT GCCACGTCGT TCCGTTCGGC
GTCGATCTTC GGAAATTCGC GGCGCTGGAA AACAGCGAGC GGCCGGGCTC CGCCGGCCGG
CGCGTCGTCG CCTGCGGCCG CCTCGTGCCG TACAAGGGCT TCGACGTGCT GATCCGTGCC
GCGGCCGACC ACGACTTCGA GGTCAGGATC ATCGGCGAGG GACGCGAGCG CGCTCATCTG
CAGCAGCTGA TCGACGGCTT CGGAATCGCG GATCGAGTCC GGCTGCTCGG CTCGCTATGC
GATGACGAGA TGGTGGCCGA GATCGGCGCC GCCGACGTCT TCGTCATGCC CTCGGTCACC
AATGCCGAGA CCTTCGGGCT CGTGCAGTTG GAGGCGATGG CGGCCGGCCG TCCGATCGTC
AACACCGCGC TCGACACCGG CGTGCCCCGC GTCGCCCGTG ATGGCCGCGA GGCCGTCACC
GTGCCGCCGA GCGATGCCGT GGCGCTCGCC GGAGCGATCA ACGCGCTGCT CGCCGACCCC
GCGCGCCGCC GCCGCATGGG GGATGCCGCA CGGCAGCGCG CGGCGACGCA TTTTGCGACC
GCGGCATTCG ACCAGGGCAT CGAGCGGATC TATCGCCGCG CTGTCGCCGC GCATGCGGCG
GCGCATCGCG CATCGGAGCA GGGTGTCGGA CTGCTCGATT CGGTTCGGAT CGCCGCCGCG
CTGGCTTGGT CGGATCTGCG CCATCGCTAC GTGCGCTCGC TGCTCGGCCC GTTCTGGATG
TCGATCCAGA TGGCGATCAT GGTGGCGGTG CTCGGCTCGG TGATCAGTCA TTTCGGCCCG
GCCGGCGGGT TGTCCCGGCT GCCGATGCTG GCGCTCAGCC TCACCGCATG GACGTTCCTG
AACGGCGTCG TGCTCGATGC CACCACGGCG CTGCAGGCGT CGGCCAGCCT GATCAAGGAC
CGCGCCTTGC CGCCGGTCGT GTTCCTGCTG CAATGCTGTT TCCGCCAGGG CCTGTTCGCG
CTTCACAACG CCTGTGTGCC GCTGGCGCTG TGGCTCGCGA TCGATCCGAT GGATGTCGGC
GGCGTGTTCG CCGCGTTGCC GGGCGTGCTG CTGTTCATCG CCTTCACCTT CGCGGCGAGC
CTCGTGCTCG GCGCCCTGGC CACGCGGTTT CGCGACCTCA AGCCGATCAT CGAATCCTGC
CTGACGCTCG CCTTCCTGGC CTCGCCCGTC ATCTGGTCCC CCGAGATGAT CGACCGCGGG
TCATTCATCA TGCGGGTGAA TCCGCTGACG CATCTGTTCG CGATCTGGCG CGAGCCGCTG
GCAACCGGGC AGGTCCCGAT GTCGAGCGTC CTCTACGTGG TCATGAGCCT GTCGGTGCTC
GTGGTCGCGA GTCTCGTGAC GTTGAGCCGG CTGCGCAAAG CCGCCTTCTG GATTTGA
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| Protein sequence | MDAAPASSRR FSVLHVFKVF YPDLFGGTLT VIRDICAGLA HAVASSVLVC SDAPRPRHEI
VNGIPVERVR SLGNLFSLPI APTYPFRLWR RIAAYDLVAL HAPFPLADLV FACGLGRARP
LVVHWHADIV SHGRLRWLVE PLMRRTLQRA EAIIVSDAAL ATRTALLRDV ANKCHVVPFG
VDLRKFAALE NSERPGSAGR RVVACGRLVP YKGFDVLIRA AADHDFEVRI IGEGRERAHL
QQLIDGFGIA DRVRLLGSLC DDEMVAEIGA ADVFVMPSVT NAETFGLVQL EAMAAGRPIV
NTALDTGVPR VARDGREAVT VPPSDAVALA GAINALLADP ARRRRMGDAA RQRAATHFAT
AAFDQGIERI YRRAVAAHAA AHRASEQGVG LLDSVRIAAA LAWSDLRHRY VRSLLGPFWM
SIQMAIMVAV LGSVISHFGP AGGLSRLPML ALSLTAWTFL NGVVLDATTA LQASASLIKD
RALPPVVFLL QCCFRQGLFA LHNACVPLAL WLAIDPMDVG GVFAALPGVL LFIAFTFAAS
LVLGALATRF RDLKPIIESC LTLAFLASPV IWSPEMIDRG SFIMRVNPLT HLFAIWREPL
ATGQVPMSSV LYVVMSLSVL VVASLVTLSR LRKAAFWI
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