| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7030 |
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| Symbol | |
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| ID | 5149710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7360591 |
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| End bp | 7361340 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640561708 |
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| Product | putative pilus assembly protein, cpaB |
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| Protein accession | YP_001242819 |
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| Protein GI | 148258234 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.383931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.799048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCGCAT ATCTCGCGAG CGGATCCGAC GATCGGCCGG CTCCGGTCGC CGCTGTTGCG
CCGACCGTGG AGACCGTCGA AGTCCTGGTC GCCAAATCCG ACATCAACCT CGGCCAGTCG
CTGAAGCCTG AACACCTGCA ATGGCAGAGC TGGCCGGCGG CGACGACGAG CTCCAGCTTC
ATCCAGCGCA AGGATCGGTC GAAGGGCGAT GCCGAGGTGA CCGGCATGAT TGCCCGGGCG
CCGTTCATCG CCGGCGAGCC GATCCGCGAG CAGAAGCTGG TCAAGGCCGA TGGCTCGGGC
TTCATGGCCG CGATCCTCCC CGCCGGCATG CGCGCCGTCT CCACCGAGAT CTCACCGGAG
ACCGGGGCCG GCGGCTTCAT CCTGCCGAAT GATCGGGTCG ACGTGCTCTT GTCCAAGCGC
GAGCGCAATC CGGAGCAGCC CAATGCCGGC GACGTCATCA GTTCGGAGAT CATTCTGTCG
AACATTCGTG TCCTGGCGAT CGACCAGGCG CCCAAGGAAA AGGATGGCCA GACCACCGTC
GTGGGCAAGA CCGTCACCCT GGAACTGAAG CCGGAGCAGG CCGAGACGCT GGCGCGCGCG
CGCCAGAGCG GGACCCTGTC GCTGGCCCTG CGCAGCATTG CCGACATCAA CGTCGCCGAG
AACCGCTCTG ACGAGAACAG CCGCAGGCGC GGCGACAGCG TCGCCGTCAT CCGCTTCGGC
ATTCCCAGCA CGATGACGAC GCAGAAGTGA
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| Protein sequence | MAAYLASGSD DRPAPVAAVA PTVETVEVLV AKSDINLGQS LKPEHLQWQS WPAATTSSSF
IQRKDRSKGD AEVTGMIARA PFIAGEPIRE QKLVKADGSG FMAAILPAGM RAVSTEISPE
TGAGGFILPN DRVDVLLSKR ERNPEQPNAG DVISSEIILS NIRVLAIDQA PKEKDGQTTV
VGKTVTLELK PEQAETLARA RQSGTLSLAL RSIADINVAE NRSDENSRRR GDSVAVIRFG
IPSTMTTQK
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