Gene BBta_7001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7001 
Symbol 
ID5149853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7336915 
End bp7337679 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID640561681 
Producttwo-component response regulator 
Protein accessionYP_001242792 
Protein GI148258207 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.746604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCGGT ACGCCCGTGC CCTCACCGGT AGCCAGGGGT CCGGGGATGC TTATGTCGGC 
GCGATGCTGG AGGCTCTGAT CCAGGACCCG GCCCTGCTCG ACGAGCGCTA CGGCGCGCGC
GCGGGTCTTT TCCGGCTGTT TACTCAGATC TGGAATTCGG TCGCCCTGAA CGACGACGCC
GAGGTGGCCA CCTTGCCGAT GCCCCCGGAG CGGCGGCTCT CCAATATCAC TCCGTTACCG
CGCCAGGCGT TCCTGTTGTT GTCGCTGGAG GGCTTCCCCG AGGAGGAAGT GGCTTTCATC
CTCGACATCG ACGTCGCAGA GACGCGGCGA CTTGCGGATG CGGCCGGCCG GGAGCTTGCT
GCAGAGATCG CGACCGATGT CCTCATCATC GAGGACGAAA CCTTCATCGC GATGGACCTT
GAGAGCCTGA TAAAGAATCT CGGGCACAAC GTCATCGGGG TCGCGCGGAC GCATGCGGAC
GCGGTCGCGC TCGCAAAGAA CAAGAAGCCG GGCCTGATCC TGGCAGATAT TCAGCTTGCG
GACGGTTCAT CGGGGCTCGA TGCCGTGAAC GAGTTGCTGC GGACCTTTGA GGTGCCGGTG
GTTTTCATCA CCGCCTATCC GGAACGGTTC CTCACCGGCG AGCGACCGGA ACCGGCATTC
CTCATTTCCA AGCCGTTCCA GCCGGCAATG GTGTCCGCTG TCGCGAGCCA GGCTCTGTTC
TTCCAGCGCA ATTCGCGCAA CAGGATGCCC AAGCCGGCTG CCTGA
 
Protein sequence
MRRYARALTG SQGSGDAYVG AMLEALIQDP ALLDERYGAR AGLFRLFTQI WNSVALNDDA 
EVATLPMPPE RRLSNITPLP RQAFLLLSLE GFPEEEVAFI LDIDVAETRR LADAAGRELA
AEIATDVLII EDETFIAMDL ESLIKNLGHN VIGVARTHAD AVALAKNKKP GLILADIQLA
DGSSGLDAVN ELLRTFEVPV VFITAYPERF LTGERPEPAF LISKPFQPAM VSAVASQALF
FQRNSRNRMP KPAA