Gene BBta_6980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6980 
Symbol 
ID5149728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7316100 
End bp7317755 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content64% 
IMG OID640561662 
Productsulfite/ferredoxin-nitrite reductase 
Protein accessionYP_001242773 
Protein GI148258188 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCTT ATGACGACAT CGATCGCACC CTGGTCAATG AGCGCGTCGC TGAATTCCGC 
GACCAGGTGA AGCGCCGCCT GTCCGGCGAG CTCACCGAGG ACGAGTTCAA GATCCTGCGG
CTGCAGAACG GCGTGTATCT GCAGCTCCAC GCCTACATGT ACCGCATCGC GATTCCCTAT
GGCACGCTGT CGTCCGAGCA GCTGCGCCGG CTGGCGCATG TCGCGCGGCG TTATGACCGC
GGCTACGGTC ACTTCACGAC CCGGCAGAAC ATCCAGTTCA ACTGGATCAA GCTCGCCGAG
CTGCCGGATG CGATGGCCGA CCTCGCCGAG GTCGGCATCC AGTCGATGCA GACCTCCGGC
AACAACATGC GCAACGTCAC CTCCGACCAG TGGGCCGGGG TCGCGCCGGG CGAGGTCGAG
GATCCCCGCA TCTGGGCCGA GCTGCTGCGC CAGTTCACGA CGCTGCATCC GGAATTCTCG
TTCCTGCCGC GCAAGTTCAA GATCGCGATC ACCGCGTCCG CGCACGACCG CGCCGCGATC
AAGATCCACG ACATCGGCCT TCGTCTGCTG AAGAATGAGC AGGGCGAGAC CGGCTTCGAG
GTGCTGGTCG GCGGTGGCCT GGGCCGCTCG CCCTTCATCG CCAAGACGAT CAAACCGTTT
GTCCATGGCC ACGACATTCT GAGCTATGTC GAGGCGATCC TGCGCGTCTA CAACCAGTAC
GGCCGCCGCG ACAACATCTA CAAGGCGCGC ATCAAGATCC TGGTCCACGA GCTCGGCATC
GAGACGTTCG CCGCCGAGGT CGAGGAGGAG TGGCAGCAGA TCCGCGACGG CGTGCTCAAG
CTCGACGACG GTATCGTCGA GGACATCCGG TCGCGCTTCT TCTATCCGGC CTATGAGACG
CTGCCGCACA TGCCGGACGA GCTGCGGCAG GCCGCGCATG ATCCGAAGTT CGAGGCCTGG
CGCAAGAACT CGGTGGTCGC CCACAAGGTG CAGGGCTATG CGATCGTGAC CGTGTCGCTG
AAGCCGATCG GCAAGCCTCC CGGCGATGCG ACCGCCGACC AGATGGATGC GCTCGCTGAC
ATCGCCGACA AATATTCGTT CGGCGAGATC CGCGTCGGCC ACGAGCAGAA TCTGGCGCTG
CCGCATGTCC GCAAGCGCGA TCTGCCGGCG GTGTGGAAGG CGCTCGACGC CATCGGGCTC
GCCATTCCCA ACGTCAACCT GGTCTCCGAC ATCATCGCCT GCCCGGGGCT CGATTACTGC
TCGCTGGCCA ATGCGCGTTC GATCCCGATC GCGCAGGAGA TCACCCGCCG CTTCGCCAAT
CACGACACGG CGAACCTGAT CGGCCGGCTG CACATCAACA TCTCCGGCTG CATCAATGCC
TGCGGCCACC ACCATGTCGG CCATATCGGC ATCCTCGGCG TCGAGAAGAA CAACGAGGAA
TTCTATCAGA TCACCATCGG CGGCCGCGCC GACGAGGGCG CCGTGCTCGG CACCCTGATC
GGACCCGCGG TGCCCTATGC CGAAGTCGCC GATGTCGTCG AGGACATCGT CGAGGCCTAT
CTTGCGCTGC GCGCGAGCCC CGAGGAGCTG TTCGTCGACA CGGTGGCGCG GCTCGGGGTC
GAACCATTCA GGGAGCGGGT TTATGCCACT CGTTAA
 
Protein sequence
MYAYDDIDRT LVNERVAEFR DQVKRRLSGE LTEDEFKILR LQNGVYLQLH AYMYRIAIPY 
GTLSSEQLRR LAHVARRYDR GYGHFTTRQN IQFNWIKLAE LPDAMADLAE VGIQSMQTSG
NNMRNVTSDQ WAGVAPGEVE DPRIWAELLR QFTTLHPEFS FLPRKFKIAI TASAHDRAAI
KIHDIGLRLL KNEQGETGFE VLVGGGLGRS PFIAKTIKPF VHGHDILSYV EAILRVYNQY
GRRDNIYKAR IKILVHELGI ETFAAEVEEE WQQIRDGVLK LDDGIVEDIR SRFFYPAYET
LPHMPDELRQ AAHDPKFEAW RKNSVVAHKV QGYAIVTVSL KPIGKPPGDA TADQMDALAD
IADKYSFGEI RVGHEQNLAL PHVRKRDLPA VWKALDAIGL AIPNVNLVSD IIACPGLDYC
SLANARSIPI AQEITRRFAN HDTANLIGRL HINISGCINA CGHHHVGHIG ILGVEKNNEE
FYQITIGGRA DEGAVLGTLI GPAVPYAEVA DVVEDIVEAY LALRASPEEL FVDTVARLGV
EPFRERVYAT R