| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6956 |
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| Symbol | |
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| ID | 5148912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7291666 |
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| End bp | 7293381 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640561638 |
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| Product | oligopeptide ABC transporter (substrate-binding protein) |
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| Protein accession | YP_001242749 |
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| Protein GI | 148258164 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCCG TCGGGCTGAC AGCGCCGATG GCCGGCATGA TGCTGGCACA TTCCGGGGTC
GCCATGGCGG CTCAGGACTT CCCCTACAAG CCCACCAAGG CCGGCGGCGG CGGGCCCTTG
AAGCTGCTGT TCTGGCAGGC GCCGACGCTG CTCAATCCCC ATTTTGCCAT CGGCACGAAG
GACCAGGAGG CGGCGCGGGC CTTCTACGAG CCGCTTGCCG GCTGGGATGC GGAGGGTAAT
CTCGTGCCGG TGCTGGCGGC AGAGATTCCC AGCATGGCGA ACGGCACGGT CGCAGCGGAC
GGCACCTTCG TCATCTGGAA GCTGAAGCAG GGCGTGACGT GGCATGACGG TCATCCGTTC
ACCGCCGACG ACGTGATCTT CAACTGGCAA TATGCGACCG ATCCCGAGAC GTCGGCGGTC
ACCAGCGGCG ATTACAAGCA CATCAAGGCA ATCGAGAAGA TCGACGACCA CACCATTCGC
GTCGTGTTCG CGCAGCCGAC GCCGTTGTGG ATGACGGGCT TCGTCGGCGG CGGCAGCGCG
CTGATTCCCA AGCATCTGTT CGGCGACTAT ATCGGCGCCA AGTCGCGCGA GGCGCCGAAC
AATCTCAAGC CGGTCGGAAC CGGCGCCTAT CTGTTCGTCG ATTTCAAGCC GGGCGACGTT
CTGCTCGGCA AGCTCAACCC GAATTATCAC GTGCCGAACC GGCCGTATTT CGATACGCTC
GAGATCAAGG GCGGCGGCGA TGCGGTCTCG GCGGCGCGCG CGGTGCTGCA GACCGGCGAA
TACGACTATG CCTGGAATCT GCAGGTCGAG GATGAGATCC TGCTGAAGCT GGAGAGCGGC
GGGGCAGGCC AGGTCGAGAT CGTGCCCGGC GGCAATTTCG AGTTCATCCT GCTCAACGCC
ACCGATCCCT GGACAGAGGT GGATGGCGAG CGCTCCAGCA TCCGGACGAA GCACCCGGTG
TTGTCAGACC CGGCGGTGCG GGCGGCCATC AATATGCTGA TCGATCGCGC GTCGGTGCAG
AAATACGTCT ACGGGCGCGG CGGCATCGCG ACGGCCAACT GCATCAACAA TCCTGCACGC
TATCGCTCGC CGAACACCAG CTTCGAGTTC AGCATCGCCA AGGCGAACGA ACTGCTCGAT
GGCGCCGGCT GGAAGAAGGG CGCCTCCGGC ATAAGGGAGA AGGATGGCAA ACAGCTCAAG
CTGGTGTTCC AGACCTCGAT CAACGCGCCG CGGCAGAAGA ACCAGGCGAT CATCAAGCAG
GCCTGCCAGA AGGCCGGCAT CGAGCTTGAG CTGAAATCGA TCGTCGGATC GGTGTTCTTC
TCCAGCGACA CCGCCAATCC GGACACTTAC GCGCATTTCT ACTGCGACAT GGAGATGTAT
CAGTGGTTCA CGCTGTCGCC CGAGCCGCAG AACTTCATGA ACCAATATGT CTCGTGGGAG
GTGGCGAGCA AGGCCAACAA ATGGCAGGGG CGCAACATCA GCCGCTGGCA GAGCAAGGAC
TATGACGATC TCTACAGGGA ACTGACGCGG GAGATCGATC CGGTGAAGCG CGCCGCGCTG
TACATCAGGC TCAACGACAC GGTCTGCGCC GGTCACCACG TGCTGCCGCA GCTCAGCCGG
CCGCGCATGT CGGGACTCCG AAGGGGGCTG CAGACCCATT CCTCCGGCTG GGACAACGAT
CTGTGGCAGC TGCCGAACTG GTATCGTGAA GGCTGA
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| Protein sequence | MLAVGLTAPM AGMMLAHSGV AMAAQDFPYK PTKAGGGGPL KLLFWQAPTL LNPHFAIGTK
DQEAARAFYE PLAGWDAEGN LVPVLAAEIP SMANGTVAAD GTFVIWKLKQ GVTWHDGHPF
TADDVIFNWQ YATDPETSAV TSGDYKHIKA IEKIDDHTIR VVFAQPTPLW MTGFVGGGSA
LIPKHLFGDY IGAKSREAPN NLKPVGTGAY LFVDFKPGDV LLGKLNPNYH VPNRPYFDTL
EIKGGGDAVS AARAVLQTGE YDYAWNLQVE DEILLKLESG GAGQVEIVPG GNFEFILLNA
TDPWTEVDGE RSSIRTKHPV LSDPAVRAAI NMLIDRASVQ KYVYGRGGIA TANCINNPAR
YRSPNTSFEF SIAKANELLD GAGWKKGASG IREKDGKQLK LVFQTSINAP RQKNQAIIKQ
ACQKAGIELE LKSIVGSVFF SSDTANPDTY AHFYCDMEMY QWFTLSPEPQ NFMNQYVSWE
VASKANKWQG RNISRWQSKD YDDLYRELTR EIDPVKRAAL YIRLNDTVCA GHHVLPQLSR
PRMSGLRRGL QTHSSGWDND LWQLPNWYRE G
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