| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6953 |
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| Symbol | oppC |
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| ID | 5149217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7287698 |
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| End bp | 7288630 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640561635 |
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| Product | oligopeptide ABC transporter (permease protein) |
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| Protein accession | YP_001242746 |
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| Protein GI | 148258161 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCCACG CATCTCCTTC CGTTGAGGCG GCGCCGGTCG CCGCGTCGGG CAAACGGCGC
TTCTCGCCCG GCCGCGACGC GCTGCGCCGC TTCCTGCGCC ATCGCATGGC GGCCGCCAGC
ATCCTCGTGC TCGCGCTGCT GGCGCTGTCG ATCGTGCTCG GGCCGCTGCT CTGGCGCATC
CCGATCAACG AGATCGACTT CACCGCGCGG CTGGCGCCAC CGTCCTGGGA GCACCCGTTC
GGCACCGACG ATCTCGGCCA GGATCTGCTG GCGCGCATGA TCTATGGCGG CCGCATCTCG
CTCGCGGTCG GCTTCGCCGC GATGGGCGTG GCGCTGATCG TCGGCATCGT CGTCGGCGCG
CTCGCCGGCA CCTCCAAGGG ACCGGTCGAC GCCGCGCTGA TGTGGCTGAC GGACCTGTTC
CTGTCGCTGC CGCAGCTGCC GCTGCTGCTG CTCATCATCT ACCTGTTCCG CGACTTCCTC
AAAGGATGGC TGGGGCCGGA GGGCGGCGTG TTCGTCCTCA TCGTGCTGGT GATCGGCGGC
TTTCGCTGGA TGCCGGTGGC CCGCTTGGTG CGCGCGCAGT TTCTGTCGCT GCGCGAGAAG
GAGTTCGTCG AGGCCGCGCG TGCGCTCGGG GCTTCCAACG TCCGCCTCGT CGTCCGCCAC
ATCCTGCCCA ATGCGCTCGG TCCGGTGATC GTTGCCGGCA CGATCGACGT CGCCGCCGCC
ATCATCGCGG AATCGACGCT GTCGTTCCTG GGCCTCGGCT TTCCGCCTGA CATTCCGACC
TGGGGCCGGC TGCTGTTCGA CGCCAAGGAT TATCTCGACA TTGCGCCGCA TTGGGCGCTG
TTCGCCGGCG GCGCGATCTT CCTGACCGTG ATCGCGATCA ATTTCATCGG CGATGGCCTG
CGCGATGCGC TCGATCCGCG GAAGGTGATG TGA
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| Protein sequence | MTHASPSVEA APVAASGKRR FSPGRDALRR FLRHRMAAAS ILVLALLALS IVLGPLLWRI
PINEIDFTAR LAPPSWEHPF GTDDLGQDLL ARMIYGGRIS LAVGFAAMGV ALIVGIVVGA
LAGTSKGPVD AALMWLTDLF LSLPQLPLLL LIIYLFRDFL KGWLGPEGGV FVLIVLVIGG
FRWMPVARLV RAQFLSLREK EFVEAARALG ASNVRLVVRH ILPNALGPVI VAGTIDVAAA
IIAESTLSFL GLGFPPDIPT WGRLLFDAKD YLDIAPHWAL FAGGAIFLTV IAINFIGDGL
RDALDPRKVM
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