| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6952 |
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| Symbol | oppD |
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| ID | 5149216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7286700 |
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| End bp | 7287701 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561634 |
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| Product | oligopeptide ABC transporter ATP-binding protein |
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| Protein accession | YP_001242745 |
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| Protein GI | 148258160 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGGACG CGCGTGTCGC ACCGCTCCTC GAGATCAAGG GGCTCAAGAC CTACTTCAAC
AGCGACGAAG GCCAGGTCCA GGCCGTCGAC GGCGTCGACA TCTCGATCAA CCGTGGCGAG
ACCCTGTGCG TGGTCGGCGA GTCCGGCTCC GGCAAGACCG TGACCGCGAT GTCCGTGCTG
AAGCTGATCG CGATGCCGCC GGGCCGCATC GCCGGCGGGC AGATCCTGTG GCAGGGCCGG
GACCTGGTGC CGCTCAACTC CTCCGAGATG AACAAGATCC GCGCCAGCGA GATCGCGATT
GTGTTCCAGG AACCGATGAC GTCGCTCAAT CCGGTCTACA CCGTCGGCGA CCAGATCTCT
GAGGTGATCC GGCTGCATCA GGGCCTGTCG AAGAAGGCCG CGATGGAGCG CGCGGCGGAG
ATGCTGGCGC TGGTTCAGCT TCCCAACCCG CAGCGCCGCA TTCACGACTA CCCGCATCAT
TTCTCAGGCG GCCAGCGCCA GCGGGTGATG ATCGCGATGG CGCTGTCGTG CAATCCGAAG
CTCCTGATCG CGGACGAGCC GACCACCGCG CTCGACGTGA CGATCCAGGC CCAGATCCTC
GATCTGCTGC TCGACATGAA GGAGCGGCTC GGCATGTCGA TCATGCTGAT CACCCACGCG
ATGGGCGTCG TCGCCGAGGT CGCGCAGCGC GTGGTGGTGA TGTATGCGGG CCGGGTCGCG
GAGGAGGCGC CGGTCGAGCG CCTGTTCGCC AATCCGCGTC ATCCCTACAC CCAGGGCCTG
ATCCGCTCGA TCCCGCGGAT CGATCTCGCC GCAGTGAAGA AGAGCCGGCT GGAGAGCATT
CCGGGCAGCG TGCCGAAGCT GATCAATCCG CCCGAAGGCT GCCGCTTCGC CTCGCGCTGC
CGCTTCGCCA TTCCCGACTG CACGCGCGCG CAGCCCGAGC TGCGCGAGAT CGAGCCCGGC
CACAAGGTGG CGTGCATCCG CGCCGAAGAG ACGTTGCTGT GA
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| Protein sequence | MMDARVAPLL EIKGLKTYFN SDEGQVQAVD GVDISINRGE TLCVVGESGS GKTVTAMSVL
KLIAMPPGRI AGGQILWQGR DLVPLNSSEM NKIRASEIAI VFQEPMTSLN PVYTVGDQIS
EVIRLHQGLS KKAAMERAAE MLALVQLPNP QRRIHDYPHH FSGGQRQRVM IAMALSCNPK
LLIADEPTTA LDVTIQAQIL DLLLDMKERL GMSIMLITHA MGVVAEVAQR VVVMYAGRVA
EEAPVERLFA NPRHPYTQGL IRSIPRIDLA AVKKSRLESI PGSVPKLINP PEGCRFASRC
RFAIPDCTRA QPELREIEPG HKVACIRAEE TLL
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