Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6951 |
Symbol | oppF |
ID | 5149215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7285702 |
End bp | 7286700 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640561633 |
Product | oligopeptide ABC transporter ATP-binding protein |
Protein accession | YP_001242744 |
Protein GI | 148258159 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CCGCCATTGC TCCTGCCACC GCACCGGCGC CTTTGCTCAG CGTACGCAAT CTGACCAAGG CGTTTCCGAT CCGGGGCGGA TTGTTGAAGC GCCAGATCGG CAGCGTTCGC GCCGTCGACG GCGTCAGCTT CCACATCGAA CCGAGCGAGA CGTTCGGCCT TGTCGGCGAG TCCGGTTGCG GCAAGTCGAC CACCGGCCGC TGCGTGCTCC GGCTGATCGA GCCGAGCTCG GGCGAGCTGA TATTCGAAGG CAAGGACGTG ATCGCGCTGT CCGGCGAGAG CCTGCGGGCG CTCCGCCGCG ACATCCAGAT CATCTTTCAG GACCCCTACG CCTCGCTCAA TCCGCGCATG ACCATCGGCG CCATCATCGG CGAGGCGCTG ACGATCCATG GGCTCGCCGC CTCGCGTCAG AAATACGAAG AGCGCATCGT CCATCTGCTC GAGACGGTCG GCCTGCAGGC CGATCATATG ACGCGCTATC CGCACGAATT CTCCGGCGGC CAGCGCCAGC GCATCGGCAT TGCACGCGCG ATCGCAGTCG AGCCCAAGCT GATCATCTGC GATGAGCCGG TGTCGGCGCT GGACGTCTCG ATCCAGGCGC AGGTCATCAA TCTGCTCGAG GACCTGCAGC AGAAGTTCGG CATCGCCTAT CTGTTCGTCG CCCACGATCT CTCGGTGGTC GAGCATATCA GCCGCCGCGT CGCGGTGATG TATCTCGGCC GCATCGTCGA GACCGCGCCG TCACGGCTGC TTTATTCGGC GCCGAAGCAT CCCTACACCG AAGCGCTGCT GTCCGCGGTG CCGATCCCGG ATCCGAGCGT CAAGCGCAAG CGCATCCGGC TCAAGGGCGA GGTGCCGAGC CCGATCGATC CGCCGTCAGG CTGTCACTTC CATACCCGCT GCCCCATCGC CAAGGATGTC TGCAGCAAGG AGGTGCCGCC GCTGAAGGCG AGCGCCGAGG GGCATCTCGT CGCCTGCCAT TTCCGGTGA
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Protein sequence | MTDTAIAPAT APAPLLSVRN LTKAFPIRGG LLKRQIGSVR AVDGVSFHIE PSETFGLVGE SGCGKSTTGR CVLRLIEPSS GELIFEGKDV IALSGESLRA LRRDIQIIFQ DPYASLNPRM TIGAIIGEAL TIHGLAASRQ KYEERIVHLL ETVGLQADHM TRYPHEFSGG QRQRIGIARA IAVEPKLIIC DEPVSALDVS IQAQVINLLE DLQQKFGIAY LFVAHDLSVV EHISRRVAVM YLGRIVETAP SRLLYSAPKH PYTEALLSAV PIPDPSVKRK RIRLKGEVPS PIDPPSGCHF HTRCPIAKDV CSKEVPPLKA SAEGHLVACH FR
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