Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6924 |
Symbol | recQ |
ID | 5150548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7252431 |
End bp | 7254308 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640561606 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001242717 |
Protein GI | 148258132 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.286849 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCAG CCCCCAACGC CACGACCGAT ACGGCCGATC GCGCGCTGGC CGTGCTGCAT TCGGTGTTCG GGCTGCCGGG CTTTCGCGGC GCGCAGGAGA AGGTGGTCCG GCATGTCACC GCGGGCGGCA ATTGCCTGGT GCTGATGCCG ACCGGCGGCG GCAAGTCGCT GTGCTATCAG CTGCCGGCGC TGCTGCGCAA AGGCTGCGGA ATCGTCGTCT CGCCGCTGAT TGCCTTGATG CGCGACCAGG TCGCCGGGCT GACCGAGGCG GGCGTCAATG CCGCGGTGCT GAACTCGACG CTGTCGCGCG AGGAGGCCGA CGAGGTCGAG CGGCGGCTCA TCGCCGGCGA TCTCGATTTA CTTTACGTCG CGCCGGAGCG GCTGGTGACG CCGCGCTGCC TGGCGCTGCT GGAGCGCGCT GACATCGCGT TGTTCGCGAT CGACGAGGCG CATTGCGTGT CGCAATGGGG GCACGATTTC CGCCCGGAAT ATATCGGCCT GTCGATCATT GCCGAACGCT TCCCCGAGGT GCCGCGCATC GCGCTGACCG CGACCGCCGA CGAGCTGACG CGCAAGGAGA TCGCCGAACG GCTCGGCCTC ACCGACGCAC CGCAATTCGT CGCGAGCTTC GACCGCCCGA ACATCCGCTA CGAGATCGTC GACAAGAACA ACGGGCCGGC GCAGCTGAAG GCCTTCATCA AGGAGCGCCA CCCGGGTGAC GCCGGCGTAG TCTACTGCCT GTCACGCGCC AAGGTCGAGG ATACCGCGGC GGCGCTGACC GAGGCCGGCA TCACCGCGAT CCCCTATCAT GCCGGGCTCG AGGCGAGCGT GCGTTCGCGC AACCAGGACC GCTTCATCAA CGAGGACGGC ATCGTCGTCG TCGCGACCGT CGCCTTCGGC ATGGGCATCG ACAAGCCCGA CGTGCGCTTC GTGGCGCATC TCGATCTGCC GAAAAGCATC GAGGCCTACT ACCAGGAAAC CGGACGCGCC GGGCGCGACG GCAAGCCGTC GACCGCCTGG ATGGCCTACG GCCTGTCCGA CATCGTGCAG CAGCGCCGGA TGATCGACGA GTCCACCGGC GCCGAGGCGT TCAAGCGGGT GTCGATCCGC AAGCTCGACG CGCTGGTGGC GCTGGCCGAG ACCGCCGGCT GCCGGCGCCG GCTGCTCCTG AGCTATTTCG GCGAGACCCC GGCGGACGAG AAATGTGGCA ATTGCGACAA TTGCCTGTCG CCGCCGCAGG TGCGCGACGG CAAAGTGATC GCGCAAAAGT TGCTGTCCTG TGCCTATCGC ACCGGGCAGC GCTTCGGCGC CATGCATTTG ATCGACGTGC TGGTGGGGCG CGCGACCGAG CGCGTCAAGC AGTTCGGACA TGATCAATTG TCAGTGTTCG GCGTCGGGCG CGAACTTAAT GAGAAGCAAT GGCGCGCGGC GCTGCGCCAG CTGGTGGCGA TGGGCCATCT CGCGCCGGAC AGCGAGGCCT ATGGCGCGCT GAAGCTGACG GAGAGCGCGC GCGGCGTGTT GAAGGGCGAG ACGCCGATCC TGCTGCGCGA GCAGACGGCG AGCACCGGCC GTGCGATCCG CAGCAAATCG CGGCGTGGCG ACCTGGTGCA GCGGCCGGCC GCGGCAGGCG ATGCCACGCT GCTCGCGCGC CTGCGGGCCT GGCGCTCGGA GATCGCGCGC AAGCGTGGTG TACCAGCCTA TGTCGTGCTG CACGACGCAA CCATCGATGG CATCGCCAGC GCCCGGCCGG CCACGCTCGG GCAGCTTCGC GACATCCCCG GGATCGGTGA CAAGAAGCTT GAACATTACG GCGACGAGTT GCTGGCGCTG ATCACGGCGG CAGGCGCCTC AGGATCAGGA TCGCCATCAG ACAGTTGA
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Protein sequence | MASAPNATTD TADRALAVLH SVFGLPGFRG AQEKVVRHVT AGGNCLVLMP TGGGKSLCYQ LPALLRKGCG IVVSPLIALM RDQVAGLTEA GVNAAVLNST LSREEADEVE RRLIAGDLDL LYVAPERLVT PRCLALLERA DIALFAIDEA HCVSQWGHDF RPEYIGLSII AERFPEVPRI ALTATADELT RKEIAERLGL TDAPQFVASF DRPNIRYEIV DKNNGPAQLK AFIKERHPGD AGVVYCLSRA KVEDTAAALT EAGITAIPYH AGLEASVRSR NQDRFINEDG IVVVATVAFG MGIDKPDVRF VAHLDLPKSI EAYYQETGRA GRDGKPSTAW MAYGLSDIVQ QRRMIDESTG AEAFKRVSIR KLDALVALAE TAGCRRRLLL SYFGETPADE KCGNCDNCLS PPQVRDGKVI AQKLLSCAYR TGQRFGAMHL IDVLVGRATE RVKQFGHDQL SVFGVGRELN EKQWRAALRQ LVAMGHLAPD SEAYGALKLT ESARGVLKGE TPILLREQTA STGRAIRSKS RRGDLVQRPA AAGDATLLAR LRAWRSEIAR KRGVPAYVVL HDATIDGIAS ARPATLGQLR DIPGIGDKKL EHYGDELLAL ITAAGASGSG SPSDS
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