| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6910 |
|---|
| Symbol | |
|---|
| ID | 5150801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7236381 |
|---|
| End bp | 7237127 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640561592 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001242703 |
|---|
| Protein GI | 148258118 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.311344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCC ATTCCCAATT TAAAAACATC ATGCATCGCA AGGGCCGGCA GGATGCGATG
AAGTCCAAGC TGTTCGGCAA GCTGGCGCGC GAAATCACCG TCGCGGCCAA GCTCGGCACG
CCCGATCCGG CGATGAACCC GCGTTTGCGG GCCGCCGTGG TCGCCGCCCG CGCCGAGAAC
ATGCCCAAGG ACAATATCGA GCGCGCGATC AAGAAGGCGC TCGGCGGCGA GGGTGAGAAC
TATGCCGAGA TCCGCTACGA GGGCTACGGC CCTGGCGGTG TCGCCGTCAT CGTCGAGGCG
CTGACCGACA ACCGCAACCG CGCGGCCTCC GACATCCGCT CCTACTTCAC CAAATCGGGC
GGCAATCTCG GCGAAACCGG CTCGGTCTCG TTCATGTTCG ACCGCGTTGG CATCATCGAA
TTCGACCGCA GCGTCGCCTC CGACGATGCG GTGCTGGACG CGGCGATCGA GGCCGGCGCC
GACGACGTGA TCTCGGGCGA GGGCGGCCAC GAGGTCTATG CGTCGCCGGA CAGCTTCCAT
GAGGTCGCCA AGAACCTCGA AGCCAAGTTC GGCGAGCCGC GCAAAGCGGC GCTGACGTGG
AAACCGCAGA ACACAGTGTC GGTGGACGAC GAGACCGGCG AGAAGCTGCT GAAGCTGATG
GACCTTCTGA ACGAGCACGA CGACGTTCAG AACGTCTACG CCAATTTCGA GATCTCGGAC
GCGCTGATGG CGAAAATGGG CGGTTGA
|
|---|
| Protein sequence | MAGHSQFKNI MHRKGRQDAM KSKLFGKLAR EITVAAKLGT PDPAMNPRLR AAVVAARAEN
MPKDNIERAI KKALGGEGEN YAEIRYEGYG PGGVAVIVEA LTDNRNRAAS DIRSYFTKSG
GNLGETGSVS FMFDRVGIIE FDRSVASDDA VLDAAIEAGA DDVISGEGGH EVYASPDSFH
EVAKNLEAKF GEPRKAALTW KPQNTVSVDD ETGEKLLKLM DLLNEHDDVQ NVYANFEISD
ALMAKMGG
|
|---|
| |