| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6904 |
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| Symbol | ybgC |
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| ID | 5151325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7232142 |
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| End bp | 7232591 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561586 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001242697 |
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| Protein GI | 148258112 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0171127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.306193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACCCATC AACATCTCGA CGGCGAGATC CGCGACGGGC GCCACCATAT GCAGGTACGC
GTCTATTACG AGGACACGGA TTTTTCGGGG ATCGTTTATC ACGCCAACTA TCTCCGCTTC
ATGGAGCGCG GCCGCACCAA TCATCTGCGG CTGATGGGGG CCGAGCAGCA CGCGCTGTTC
GCCGAGGCCG CCAGCGAGGC GCCCGGCTTC GCCTTCGTCG TGCGCTCGAT GACGCTCGAT
TTCCTGCGGC CGGCCCGCAT GGACGACGTG CTCGACGTCG TCACCTGGCC GATCGCGGTC
AAAGGCGCCT CGATCACGCT GGCGCAGGAG GTGCGGCGCG GAGAGGAGGT GCTCGTCAAG
GCCGATGTCC GCGTCGCCTT CATCAGCGGC GGCAAGGCGC AGCCGATCCC AAGGCCGCTG
CGCGACCTGA TGAAGGCGGA CCTTGCTTAG
|
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| Protein sequence | MTHQHLDGEI RDGRHHMQVR VYYEDTDFSG IVYHANYLRF MERGRTNHLR LMGAEQHALF
AEAASEAPGF AFVVRSMTLD FLRPARMDDV LDVVTWPIAV KGASITLAQE VRRGEEVLVK
ADVRVAFISG GKAQPIPRPL RDLMKADLA
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