Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6901 |
Symbol | |
ID | 5151254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7225718 |
End bp | 7226407 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640561583 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001242694 |
Protein GI | 148258109 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.165859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACAAA AAAGGAAGGG GCCGCCCCCT GAAGGCTCCG TCCCAGAACA AGCGGCCGCG CGACCCGAAC CGAAACGGCG CGGGCGGCCG CGCGCCTATG AGCCGGATAT CGCTCTGGGC AAGGCGCTCG ATCTGTTCAG GACAACGGGC TTCGCCGCGA CGTCGCTCGA CGACCTCAGT GCCGCAACGG GCATGAATCG GCCTAGCCTC TATGGGGCGT TCGGCGACAA GCGCGAGCTC TACATCAAGA GCTATCAGCG CTATCGCGAC AATGCCCGCG TCGCGATGGG TGACATCTTC CGCCATGACT GGCCGGTGCG GCGACAGCTG GAGCAGATCT TCGCCACCGC GCTGGACATC TATCTCTCCG GCGAGGAGGG ACCGCGCGGC TGTTTCACGG TGATGACGGC GGGGTCGGAA GCGGTGGCTG ATCCCGACAT CCGCGCCATG GTGCAGAACG CGCTGACCGA GCTCGACAGA GCGTTCGCGC ATTGCTTCCG CCGCGCCAAG GAGAAGGGCG AACTGCCTGA GGGCGCCGAC CCCGTCGTGC TAGCGCAGCT CGCCTCGGCC ACGATCCATT CGATCGCGGT CCGCGCCCGG GCGCGGGTGC CGCGCCCGGA GCTGGAGGCG ATCGTCGCCG GCGCGATCGA TTTGATGCTG GGCGGCAGAT CGCGGGTCAG TAGCCCCTGA
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Protein sequence | MVQKRKGPPP EGSVPEQAAA RPEPKRRGRP RAYEPDIALG KALDLFRTTG FAATSLDDLS AATGMNRPSL YGAFGDKREL YIKSYQRYRD NARVAMGDIF RHDWPVRRQL EQIFATALDI YLSGEEGPRG CFTVMTAGSE AVADPDIRAM VQNALTELDR AFAHCFRRAK EKGELPEGAD PVVLAQLASA TIHSIAVRAR ARVPRPELEA IVAGAIDLML GGRSRVSSP
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