Gene BBta_6888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6888 
Symbol 
ID5151309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7215339 
End bp7215755 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID640561570 
Producthypothetical protein 
Protein accessionYP_001242681 
Protein GI148258096 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.235266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0297541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCA TGATGCTGAT GATTCCGCTC GGCTATGAGA GCGCGCCACC GGATGTGCAA 
CTCGATCCCG AGCGGGTCGC TGCGATGATG CGCTACAATG AGGCTTTGAA GGAGGCCGGC
GTGCTGATCA CGCTGGAAGG CCTGCATCCG CCGTCGATGG GCGCGCGAGT GTCGTTCGCA
GGTGGCCAGC CGATGGTCAC CGACGGGCCG TTTGCCGAGG CCAAGGAGGT GCTCGGCGGC
TTCTGGATGA TCGAGGTCGC CTCGCGTGAG GAGGCGATCG CCTGGGCCAA ACAATGCCCG
GCCTCCGACA ACGAGATCAT CGAGATCCGC CAGGTCCAGG AGATGACCGA CTTCTCCGAC
GAGGTGCAGC AGGCGGCGGC CGGCTTTGCC GAGTTACCGC ATGCCGGCCG TGCTTGA
 
Protein sequence
MRFMMLMIPL GYESAPPDVQ LDPERVAAMM RYNEALKEAG VLITLEGLHP PSMGARVSFA 
GGQPMVTDGP FAEAKEVLGG FWMIEVASRE EAIAWAKQCP ASDNEIIEIR QVQEMTDFSD
EVQQAAAGFA ELPHAGRA