| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6884 |
|---|
| Symbol | tolQ |
|---|
| ID | 5151229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7212104 |
|---|
| End bp | 7212817 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640561566 |
|---|
| Product | TolQ protein |
|---|
| Protein accession | YP_001242677 |
|---|
| Protein GI | 148258092 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02796] TolQ protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0859687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.084864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGG CTGACGTGGC TCCGGCCGCC CTTCCGGTCG TTTCCGGCGA CGTCTCCCTG
ATCGCGCTGT TCTGGCAGGC GCATTGGGTG GTCAAGGGCG TCATGCTCGG TCTCATCACC
TGCTCGGTCT GGGTCTGGGC GATCGCGATC GACAAGCTGT TTCTGTATTC GCGCACGCGC
CGTTCGATGG ACCGGTTCGA GCAGGCCTTC TGGTCCGGCG AGTCGATCGA GGAACTGTAT
CGGGCGCTCT CCGCCAAGCC GACGCAATCG ATGGCAGCCT GCTTCGTCGC GGCGATGCGC
GAATGGAAGC GCTCCTTCGA AGGTCATGCG CGCTCGTTCG CCGGCCTGCA GATGCGCATC
GAGAAGGTCA TGAACGTGTC GATCGCGCGC GAGGTGGAAC GGCTGGAACG CCGGCTTCTG
GTGCTCGCCA CCGTGGGCTC CGCGGGCCCG TTCGTCGGTC TGTTCGGCAC CGTCTGGGGC
ATCATGTCGA GCTTCCAGTC GATCGCGGCG TCGAAGAATA CCTCGCTCGC CGTCGTGGCG
CCCGGCATTG CCGAGGCGCT GTTTGCCACG GCGATCGGCC TGATCGCGGC CATTCCGGCA
ACGATTTTCT ACAACAAATT CACCTCCGAG GTGAATCGGC AGGCGCAGCG GCTGGAAGGC
TTCGCAGATG AATTTTCCGC CATCCTGTCC CGTCAGATCG ACGAGCGGGG ATGA
|
|---|
| Protein sequence | MNPADVAPAA LPVVSGDVSL IALFWQAHWV VKGVMLGLIT CSVWVWAIAI DKLFLYSRTR
RSMDRFEQAF WSGESIEELY RALSAKPTQS MAACFVAAMR EWKRSFEGHA RSFAGLQMRI
EKVMNVSIAR EVERLERRLL VLATVGSAGP FVGLFGTVWG IMSSFQSIAA SKNTSLAVVA
PGIAEALFAT AIGLIAAIPA TIFYNKFTSE VNRQAQRLEG FADEFSAILS RQIDERG
|
|---|
| |