| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6881 |
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| Symbol | tolB |
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| ID | 5151350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7209181 |
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| End bp | 7210569 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561563 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001242674 |
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| Protein GI | 148258089 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0464057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCCC TCATGAAGCA AATTCACGAT ATGCATGATC CATCCGGACT GCGCCGCGCG
CTCGTTTCGC CGACCCGCCG CCAGCTGATC GCGGGGGCGG TCGCGCTTGG CGCGGCCGGA
ATGGGTTCGA TGCGTTCTGC TTTGGCGCAA AAACGGGTGC CGATCCTGCC GGGCGAATTT
GCGCCCATTC CGATCGCGAT TCCGCCCTTC GTACCGGGCG GCGCTGGCGA TGCCGATGTC
GGCAACGGCA TCTCGCAGGT GATCACCAAC AATCTCAAGC GCAGTGGTTT GTTCGCGCCC
GTCGATCCGG CTGCGTTTCC CGAGCGCATC GCCAATTTCG AGGCCCCGCC GCAATTCGCC
AGCTGGAGGC CGCTCGCTCT GCAGGGGCTC GTGACCGGCC GCGCGACGCG ACAGCCAGAT
GGGCGGCTCA AGGCCGAGTT CCGGCTGTGG GACCCGAATT CGGGCCAGCA GCTCACCGGC
CAGCAATATG TAACGGCTCC CGAATATTGG CGGCGCATCG CCCACATCAT CTCCGACCAG
ATCTATTCGC AGATGACCGG CGAAAAGGGC TATTTCGACA GCCGCGTCGT GTTCGTCGAC
GAGAGCGGCC CGTCGGAGCG CCGCGTCAAG CGGCTGGCGC TGATGGACCA GGACGGCGCC
AATGTGCGCT ATCTGACCCG CGGCGCCGAT CTCGTGCTGA CGCCGCGCTT CTCGCCGTCG
AGCCAGGAAA TCACCTATAT GGAGTTCGGG CAGGGCGACC CGAAGGTCTA TCTGTTGAAC
ATCGAGACCG GTCAGCGCGA GATCGTCGGC AATTTCCCGG GCATGTCGTT CTCGCCGCGC
TTCTCGCCCG ACGGCCAACG CATCATCCTG AGCTTGCAGC AGGGCGGCAA CTCCAATCTG
TTTGTGATGG ATCTGCGCTC GCGCACGACC ACGCGGCTCA CCGACACGCC GGCGATCGAC
ACCTCGCCAT GCTACTCGCC GGACGGCAAT CAGATCTGTT TCGAAAGCGA TCGCGGCGGC
AAGCCGCAGA TCTATGTGAT GCCGGCCAAT GGCGGCGGCG CGCAGCGCAT CTCGTTCGGC
GAGGGCAGCT ATTCGACGCC GGTCTGGTCG CCGCGCGGCG ACTACATCGC CTTCACCAAG
CAGGGCGGCG GCCAATTCGC GATCGGCATC ATGAAGACCG ACGGCTCGGG CGAGCGCATC
CTCACGTCAG GCTTCCACAA TGAGGGGCCG ACCTTCTCGC CGAATGGGCG CGTGCTGATG
TTCTTCCGCG ATCCCGGCGG GACTGCCGGC CCGTCGCTCT ACACGATCGA CGTCTCAGGC
CGTTTCGAGC AGAAGGTGCC GAGCCCCGGC TACGCGTCGG ACCCGGCATG GTCGCCGCTT
CTGTCCTAA
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| Protein sequence | MVALMKQIHD MHDPSGLRRA LVSPTRRQLI AGAVALGAAG MGSMRSALAQ KRVPILPGEF
APIPIAIPPF VPGGAGDADV GNGISQVITN NLKRSGLFAP VDPAAFPERI ANFEAPPQFA
SWRPLALQGL VTGRATRQPD GRLKAEFRLW DPNSGQQLTG QQYVTAPEYW RRIAHIISDQ
IYSQMTGEKG YFDSRVVFVD ESGPSERRVK RLALMDQDGA NVRYLTRGAD LVLTPRFSPS
SQEITYMEFG QGDPKVYLLN IETGQREIVG NFPGMSFSPR FSPDGQRIIL SLQQGGNSNL
FVMDLRSRTT TRLTDTPAID TSPCYSPDGN QICFESDRGG KPQIYVMPAN GGGAQRISFG
EGSYSTPVWS PRGDYIAFTK QGGGQFAIGI MKTDGSGERI LTSGFHNEGP TFSPNGRVLM
FFRDPGGTAG PSLYTIDVSG RFEQKVPSPG YASDPAWSPL LS
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