Gene BBta_6876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6876 
Symbol 
ID5151591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7203612 
End bp7204658 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content67% 
IMG OID640561558 
Producthypothetical protein 
Protein accessionYP_001242669 
Protein GI148258084 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.617207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0553562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTTC CAAGGAGCGC CGCTGCGGCC ATCGCAGCGC TCGTGATTGT CTCGTACCAG 
GCATTGTCGT CGCCAGCTTT CGCCCAGGTC GACGATGATC CGGAGATCCG GATTCAGCGG
CTGGAAAATC AGCTCCGGCA GCTCACCGGT CAGAACGAGG AACTGCAATA TCGCAACCGC
CAGCTGGAAG AGCGCCTGCG TCAGCTGCAG AGCGGCGCGC AGCCGACGGC GCCGGCGGTA
CAGCCGAGTG CGGCGCCTCC GACCCAGATC GCGCCGGCTT ACGGCCAGCC CTCCCAGCCC
GCTTATGGCC AGCCGCAAGC CGGTCAGCCG CAATATGGCC AGCCGCAGCC GCAACAGGCC
TATCCGCAGC CGCAGCCGCA GCCCAATTAT GCGCAGCCGC AAGCTGCGCC CGCGCCGATC
GCGCAGGACC AGCCGGCGCC GGGAGCCGGC GTCCGGCGGC GCGGCGATGC GTTCGACCCG
AGCCAAAACC CCAGTGCGCC GGGCGCCCCG CAAGCGCTTG GCGGCGGACA ATTGCCGGTT
CAGGCGGGCG GTCAGCCGAC CGGCCGGGCC GGAGGTGACG CCGCCAGTCT CCGCACCGGG
CGTTACGACC AGGCGCCACC CGCGGCTGCC GCACCGGGTG GGCTCGATAC GGCCCCGCCG
ACACAGACCC CGCGTGACGA ATATGATCTC GGCATCGGCT ACATGCAGCG CCGCGATTAT
GCGCTCGCCG AGCAGACGAT GCGGAACTTC ACGCAGAAAT ATCCGAACGA TCCGATGATC
GGCGATGCCA AATACTGGCT CGGCGAAAGC TTCTACCAGC GGCAGCAATA TCGCGACGCC
GCCGAGGTCT TTCTGGCAGT GACGACGAAG CACGACAAAT CGTCGAAGGC GCCGGATGCG
CTGCTTCGCC TCGGCCAGTC GCTGGCGGCC TTGAAGGAAA AGGAAGCTGC CTGTGCCGCC
TTCGGCGAGA TCTCGCGCAA ATATCCGCGC GCATCGGCCG GCGTGAAGGC GACCGTCGAT
CGTGAGCAGA AGCGGGTGAA GTGCTGA
 
Protein sequence
MFLPRSAAAA IAALVIVSYQ ALSSPAFAQV DDDPEIRIQR LENQLRQLTG QNEELQYRNR 
QLEERLRQLQ SGAQPTAPAV QPSAAPPTQI APAYGQPSQP AYGQPQAGQP QYGQPQPQQA
YPQPQPQPNY AQPQAAPAPI AQDQPAPGAG VRRRGDAFDP SQNPSAPGAP QALGGGQLPV
QAGGQPTGRA GGDAASLRTG RYDQAPPAAA APGGLDTAPP TQTPRDEYDL GIGYMQRRDY
ALAEQTMRNF TQKYPNDPMI GDAKYWLGES FYQRQQYRDA AEVFLAVTTK HDKSSKAPDA
LLRLGQSLAA LKEKEAACAA FGEISRKYPR ASAGVKATVD REQKRVKC