Gene BBta_6874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6874 
SymbolftsH 
ID5151772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7200224 
End bp7202140 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content66% 
IMG OID640561556 
Productcell division protein FtsH 
Protein accessionYP_001242667 
Protein GI148258082 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0972491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA ATCTGCGCAA TTTCGCCCTT TGGGTCATTA TTGTCCTGTT GCTGTTGGCG 
CTGTTCACAC TCTTCCAAAA TCCAGGGCAA CGCGCGTCGT CCCAGGACAT CTCGTTCTCG
CAGCTGCTGA GCGAGGTCGA CCAGGGCAAT GTGCGCGACG TCGTGATCCA GGGGCCGGAG
ATCCACGGCA CCTTCAAGAA CGGCTCCTCG TTCCAGACCT ACGCGCCGAG CGATCCGAAC
CTGGTCAAGC GCCTGTATGA CGCCAAGGTC TCGATCACGG CCAAGCCGCC GGGCGACAAT
GTGCCGTGGT TCGTGTCGCT TCTGGTGTCC TGGCTGCCAT TCATCGCGCT GATCGGCGTC
TGGATCTTCC TGTCGCGCCA GATGCAGGGC GGCGCCGGCA AGGCAATGGG CTTCGGCAAG
TCACGGGCCA AGATGCTGAC GGAAGCGCAT GGCCGCGTCA CCTTCGAGGA CGTCGCCGGC
GTCGACGAGG CCAAGCAGGA CCTGCAGGAG ATCGTCGAGT TTCTGCGCGA CCCCGGCAAG
TTCCAGCGGC TCGGTGGCCG CATCCCGCGC GGCGTGCTGC TGGTCGGCCC TCCCGGCACC
GGTAAGACGC TGATCGCGCG CGCCGTGGCC GGCGAAGCCA ATGTGCCATT CTTCACCATC
TCCGGTTCGG ACTTCGTCGA GATGTTCGTC GGCGTCGGCG CGAGCCGTGT CCGCGACATG
TTCGAGCAGG CCAAGAAGAA CGCACCCTGC ATCATCTTCA TCGACGAAAT CGACGCCGTC
GGCCGCCATC GCGGCGCCGG CCTCGGCGGC GGCAATGATG AGCGCGAGCA GACCCTCAAC
CAGTTGCTGG TCGAGATGGA CGGCTTCGAG GCCAATGAGG GCGTCATCCT GATCGCCGCC
ACCAACCGTC CCGACGTGCT CGATCCGGCC CTGATGCGTC CGGGCCGCTT CGACCGCCAG
GTCGTCGTGT CCAACCCCGA CATCATCGGC CGCGAGCAGA TCCTCAAGGT CCATGTCCGC
AAGGTGCCGC TGGCGCCGGA CGTCAACCTC AAGACCATCG CCCGCGGCAC GCCCGGCTTC
TCCGGCGCCG ACCTGATGAA TCTCGTCAAC GAGGCCGCGC TGACCGCCGC CCGCCGCAAC
AAGCGGATGG TGACGCAGGC CGAGTTCGAA GAGGCGAAGG ACAAGGTGCT GATGGGCGCC
GAGCGCCGCT CGATGGTGAT GACCGAGGAA GAGAAGATGC TGACCGCCTA TCACGAGGCG
GGCCATGCGA TCGTCGGTCT CAACGTTCCG AGCCACGACC CGATCCACAA GGCCACCATC
ATTCCGCGCG GCCGCGCGCT CGGCATGGTG CAGTCGCTGC CGGAGGCGGA TCGCCACTCG
CACACCCGCG AATGGTGCGT GTCGAAGCTC GCGATGATGT TCGGCGGCCG CGAGGCCGAG
GTGCAGAAGT TCGGTCCGGA GAAGGTGACC AACGGCGCCA CCGGCGACAT CCAGCAGGCC
ACCAACCTCG CCCGCGCGAT GGTGATGGAA TGGGGCATGT CCGACAAGCT CGGCCGCGTC
CGCTACCAGA GCAATGAGCA GGAAGTCTTC CTGGGTCATT CGGTGGCGCG CTCGACCAAC
ATCTCGGATG ACACCGCCCG CCTGATCGAC TCGGAGATTC GCGGCCTGAT CGAGGCCGGT
GAGCAGGAGG CGCGCCGCAT CATCACCGAG AAGCGTGAGG ATTGGGAAGC GATCGCCCAG
GCGCTGCTCG AATATGAGAC GCTGACAGGC GAGGAGATCC TCGACCTGCT CAAGGGCAAG
AAGCCGAACC GCGAATCTGC GATCGAGCCG TCGACGCCGC GTGCCTCGGC CGTGCCGCCG
GCCGGCAAGC CCCGCCCGCG GCCCGATCCA GGCCTGGAGC CGCAGCCTCA GGCCTGA
 
Protein sequence
MNANLRNFAL WVIIVLLLLA LFTLFQNPGQ RASSQDISFS QLLSEVDQGN VRDVVIQGPE 
IHGTFKNGSS FQTYAPSDPN LVKRLYDAKV SITAKPPGDN VPWFVSLLVS WLPFIALIGV
WIFLSRQMQG GAGKAMGFGK SRAKMLTEAH GRVTFEDVAG VDEAKQDLQE IVEFLRDPGK
FQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM
FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA
TNRPDVLDPA LMRPGRFDRQ VVVSNPDIIG REQILKVHVR KVPLAPDVNL KTIARGTPGF
SGADLMNLVN EAALTAARRN KRMVTQAEFE EAKDKVLMGA ERRSMVMTEE EKMLTAYHEA
GHAIVGLNVP SHDPIHKATI IPRGRALGMV QSLPEADRHS HTREWCVSKL AMMFGGREAE
VQKFGPEKVT NGATGDIQQA TNLARAMVME WGMSDKLGRV RYQSNEQEVF LGHSVARSTN
ISDDTARLID SEIRGLIEAG EQEARRIITE KREDWEAIAQ ALLEYETLTG EEILDLLKGK
KPNRESAIEP STPRASAVPP AGKPRPRPDP GLEPQPQA