Gene BBta_6872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6872 
Symbol 
ID5151770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7197366 
End bp7198592 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content67% 
IMG OID640561554 
Producthypothetical protein 
Protein accessionYP_001242665 
Protein GI148258080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.547088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0747883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA ATTCCGTTGC CGCCGCGATC CCATCGCAGC GTCCTGGCGT TCCGGCGAGC 
CTGTTCGCAG CGTGCTTCGC GCTTGCCTGT ATCAATGCCG CGTTCTTCCC CGCAGGTCTC
TTCTCCGGCG TCTGGATCTG GGGCGCGGAC GGGCTCGGCA TCCCGACCGA TTTCGTCAAC
GTCTGGGCCG CCGGCAAGCT TGCGTTGCAG GGCCATCCGG CCCTGGCCTG GGATTGGGAC
GTGCAGCGTC AGATCGAGCT TGATCTGCTG CGGCAGGACT TCCCAGGCTA TTTCGCTTGG
CACTATCCGC CGCCCTTCCT GTTCGTTGCG GCCTTGCTCG CGCAATTGCC TTACACCTTG
GCCTTTGCCG GCTGGGTCTA TGCGAGCTTC ATTCCCTATG CGCTGGCGAT GCGGGCGATC
GTCGGCCGCG GTTTCGGCCT GTTGCTCGCG GCCGGCTTCC CAGCGCTGTT CTCGAATGCG
CTGGTTGGGC AGAACGGATG TCTCACCGCT GCGCTCGTCG GCGGCACGCT GTATTGGCTG
CCGGTGCGGC CGGTGCTGGC CGGGATCTGC CTCGGCCTCC TGACCTATAA GCCGCAATAC
GGGCTGCTGT TTCCGATCCT GCTGATCGCC ACCCAGCGCT GGACCGCGTT CGTCTCGGCC
AGCGCTACCG CCCTGGTTCT GGCGCTGGCG TCCTTCCTCG CTTTCGGCCT TGAGAGCTGG
CAGGCCTTCG TTCACTGGAT GCCGGCCTTT TCCCAGGCCT TCCTCACCGA GGGCAAGGCG
ACCTGGTGGA AGCTGCAAAG CTTGTTCTCG CTGGTGCGCT ATCTGGGCGG CTCCGAGACG
CTCGCCTGGG CCCTGCAATG GGTGCTCACC GCGGCGATCG CAATGGTGCT GGTCGTGATG
TGGCGAAGCC CGGTGCGCTA TGCGGTCAAG GCCGCGGCCC TGGCGGTCGG GCTGCTGCTC
ACGACGCCTT ATCTGTTCAT GTACGACATG ATGGTGCAGG CGATCGCGGT GGCGTGGCTG
GTGCGGATGG GCCTGCATGA CGGTTTCCGG CGCTATGAGC TGCCGGCCCT CGGCTGTAGC
GCTGGGCTCC AGATCACGTT CATGCTGACC GGCATCCCGC TCGGCCTGGC GGCCAACCTG
ATCATCGGCG GGCTGGCGCT GGCGCGAGCT GGCGCATGGT GGCGACGGCA GCCGGCTCCC
TCCGGCGCGG TGCTGTCCGC AGCCTGA
 
Protein sequence
MADNSVAAAI PSQRPGVPAS LFAACFALAC INAAFFPAGL FSGVWIWGAD GLGIPTDFVN 
VWAAGKLALQ GHPALAWDWD VQRQIELDLL RQDFPGYFAW HYPPPFLFVA ALLAQLPYTL
AFAGWVYASF IPYALAMRAI VGRGFGLLLA AGFPALFSNA LVGQNGCLTA ALVGGTLYWL
PVRPVLAGIC LGLLTYKPQY GLLFPILLIA TQRWTAFVSA SATALVLALA SFLAFGLESW
QAFVHWMPAF SQAFLTEGKA TWWKLQSLFS LVRYLGGSET LAWALQWVLT AAIAMVLVVM
WRSPVRYAVK AAALAVGLLL TTPYLFMYDM MVQAIAVAWL VRMGLHDGFR RYELPALGCS
AGLQITFMLT GIPLGLAANL IIGGLALARA GAWWRRQPAP SGAVLSAA