Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6862 |
Symbol | |
ID | 5151543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7183623 |
End bp | 7185617 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640561544 |
Product | putative oligoendopeptidase F |
Protein accession | YP_001242655 |
Protein GI | 148258070 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.916639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.20394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGC GCGCTTCTTC CGCCCTCCGC AAGCCGACCA AGTCCGCTCC TCCGTCCAAA ACCGCCAAGG CCAAGAAGGC CGCCGCCAAG CCGACGTCCG GCAAGCCGGC GTCCAACAAG CCGGCGTCCA AGTCGAAACC GGCGGTCAAA GCAGGGCGTG GTGCAGCGGC CAAATCGTCC GCCAAGCCCG CAAAGAAGGA GGTCGCGGCC AAGACGGGAA TCGGGACGCT GCCCGAATGG AATCTCGGCG ACCTGTATAT GGGCATCGAC GCACCGGAGA TCGCTCACGA TCTCGCGAAG ATGGATGCCG AATGCGTCGC GTTTGAGACG GATTACAAGG GCAAGCTCGC CGAGCATGTC GCACGCGACG ATGGCGGCGA ATGGCTTGCA GCGGCCGTGC GGCGCTACGA GGCGATCGAC GATCTTGCCG GCCGGCTTGG TTCATTCGCG GGCCTCGCGC ATGCCGGCGA CAGTGTCGAT CCGGCGATTT CCAAATTCTA CGGCGATATC TCCGAGCGAC TGACCGCTGC ATCCACGCAT CTGCTGTTCT TCCCGCTCGA GCTCAACCGC ATCGACGACG CGGTCATTGA GCGCGCGATG GAGACGCCGG CGCTCGGCCA TTACCGGCCA TGGATCGAGG ATCTGCGCAA GGACAAGCCA TATCAGCTCG AGGATCGCGT CGAGCAGCTG TTCCACGAGA AGTCGCAGAC GGGCTATTCG GCCTGGAACC GGCTGTTCGA TCAGACCATC GCCGGTCTGC GCTTCCAGGT CGGGGGAAAG GAGCTCGCGA TCGAGCCGAC CTTGAACTTC CTGCAGGACC GCGACGGTGC CAAGCGCAAG GCGGCCGCCG AGGCGCTGGC CAAGACCTTC AAGGCCAATG AGCGCACCTT CGCGCTGATC ACCAATACGC TGGCCAAGGA CAAGGACATC TCCGATCGCT GGCGCGGCTT CCAGGATGTC GCGGATTCCC GCCATCTCAA CAACCGGGTC GAGCGCGAAG TGGTCGATGC GCTGGTGGCG TCGGTGCGCG CGGCCTATCC GAAGCTGTCG CATCGCTACT ATCAACTGAA GGCGCGCTGG TTCAAAAAGA AGAAGCTCGC GCATTGGGAC CGCAACGCGC CGTTGCCCTT CGCCGCCAAC GCCACCATCG CCTGGCCGGA CGCCAAGAAC ATGGTGCTGA CGGCCTATCG CGGCTTCTCG CCTGAAATGG CCGACATCGC CCAGCGCTTC TTCGACCAGA GCTGGATCGA TGCGCCGGTG CGGCCGGGCA AGGCGCCGGG CGCGTTCTCG CATCCGACCA CGCCCTCGGC GCATCCCTAT GTGCTGATGA ACTATCAGGG TAAGCCGCGC GACGTGATGA CGCTCGCGCA CGAGCTCGGC CATGGCGTCC ACCAGGTGTT GGCGGCGAGG CAAGGCGCGC TGATGGCGCC GACGCCGCTG ACGCTCGCCG AGACCGCGAG CGTGTTCGGC GAGATGCTGA CCTTCAAGCG CCTGTTGTCC GAGACCCGCG ACGCCAAGCA GCGCCAGGCG CTGCTCGCCG GCAAGGTCGA GGACATGATC AACACGGTGG TGCGGCAGAT CGCGTTCTAT TCGTTCGAGC GCGCCGTGCA CACCGAGCGC AAGAATGGCG AGCTCACCGC CGAGCGGCTC GGTCAGATCT GGCTGTCGGT GCAGACCGAG AGCCTCGGCG AAGCGATCGA GATCAAGCCG GGCTACGAGA ACTTCTGGAT GTACATCCCG CACTTCATCC ATTCGCCGTT CTATGTCTAC GCCTATGCGT TCGGCGACTG CCTCGTGAAC TCGCTCTATG CGGTCTACGA GCATGCCGCC GAGGGCTTCG CCGAGCGTTA TCTGGCGATG CTCGCCGCCG GTGGCACCAA GCATTATTCC GAGCTGCTCG CCCCGTTCGG CCTGGACGCC AAGGACCCGA AATTCTGGGA TGGCGGCCTG TCGGTCATCG CCGGCATGAT CGATGAGCTG GAGCGGATGG GGTAG
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Protein sequence | MTSRASSALR KPTKSAPPSK TAKAKKAAAK PTSGKPASNK PASKSKPAVK AGRGAAAKSS AKPAKKEVAA KTGIGTLPEW NLGDLYMGID APEIAHDLAK MDAECVAFET DYKGKLAEHV ARDDGGEWLA AAVRRYEAID DLAGRLGSFA GLAHAGDSVD PAISKFYGDI SERLTAASTH LLFFPLELNR IDDAVIERAM ETPALGHYRP WIEDLRKDKP YQLEDRVEQL FHEKSQTGYS AWNRLFDQTI AGLRFQVGGK ELAIEPTLNF LQDRDGAKRK AAAEALAKTF KANERTFALI TNTLAKDKDI SDRWRGFQDV ADSRHLNNRV EREVVDALVA SVRAAYPKLS HRYYQLKARW FKKKKLAHWD RNAPLPFAAN ATIAWPDAKN MVLTAYRGFS PEMADIAQRF FDQSWIDAPV RPGKAPGAFS HPTTPSAHPY VLMNYQGKPR DVMTLAHELG HGVHQVLAAR QGALMAPTPL TLAETASVFG EMLTFKRLLS ETRDAKQRQA LLAGKVEDMI NTVVRQIAFY SFERAVHTER KNGELTAERL GQIWLSVQTE SLGEAIEIKP GYENFWMYIP HFIHSPFYVY AYAFGDCLVN SLYAVYEHAA EGFAERYLAM LAAGGTKHYS ELLAPFGLDA KDPKFWDGGL SVIAGMIDEL ERMG
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