Gene BBta_6838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6838 
SymbolpotG 
ID5152961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7162987 
End bp7164168 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content69% 
IMG OID640561520 
Productputrescine ABC transporter ATP-binding protein 
Protein accessionYP_001242631 
Protein GI148258046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.840617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG ACATCGCGAC CTCCGAGCCT GCTGCCGAGC CGGCGCCACC ATCGTCGCCG 
GTCCCGCGCC CTGATCCCCA GCCGCCGATC CTGCGGATCG AGAACGTGGT CAAGACCTTC
GGCAGCTTTC GGGCCGTCGA CGGCGTCTCG CTCGACATCC GGGCGGGCGA GTTCTTCGCG
CTGCTCGGTC CGAGCGGCTG CGGCAAGACC ACGCTGTTGC GCATGCTGGC CGGCTTCGAG
ACGCCGGATG AGGGCCGCAT CCTGCTGTCG GGCGAGGACA TCGCGCCGGT GCTGCCGCAT
CAGCGTCCCG TCAACATGAT GTTCCAGAAC TACGCGTTGT TTCCGCATCT CAACGTGCGC
GACAACATCG CCTTCGGCTT GAAGCGGGCC GGCATGCCGC GCGGCGAGAT CGCCAGCCGC
GTTGCGGAGA TGGTGGCGCT GGTCCGGCTT GAGGGCCTCG AGAAGCGCAA GCCCGATCAG
CTCTCGGGCG GTCAGAAGCA GCGCGTCGCG CTGGCACGCT CATTGGCCCG CCGGCCGAAG
GTGCTGCTGC TCGACGAGCC GATGGCCGCG CTGGACAAGA AGCTGCGCGA GAGCACGCAG
TTCGAACTGA TGGAGCTGCA GCGCAAGCTC GGCATGACCT TCATCATCGT CACCCATGAT
CAGGAGGAGG CGATGACGGT GGCGAGCCGG ATCGGCGTGA TGAAGGCGGG CCAGCTCGAA
CAGGTCGCCG TGCCACGCCG CCTCTATGAG GAGCCGGCCT CGCGCTGGGT CGCGGAGTTC
GTCGGCGACA TCAATCTGTT CGAGGGCGAG GTGACTGCGC GCGAGGCGCT CCGGCTCCGG
GTCGCGACCT CAACTGCGGG CGAGCTGGTG GTGGCGCAGC CGGTCGCGCC GGTCGCCGAG
ACCAAGGTCG CCGTGGCCAT CCGGCCGGAG AAGATCCGCC TGGCGCTCCG CGGACCGGCC
GCCGATGCGG CGGCGGCGGC CGCGCTCAAC CGGGTCGAAG GCGTCATTAC GGATGCGAGC
TATCTCGGCG GCAAGACCGT GTACAAGATC AGGCTCGACG GTGGCGCCGT GCTTCACGCC
GCGCAGGCGA ACACCGCGCG GCTCGACGCC GACGGTTATG GGGTGAACCA GCGCGTGGTG
GCCTGGTTCA CGCCGGATGA TTGTGTGGTG CTTGAGCGAT GA
 
Protein sequence
MADDIATSEP AAEPAPPSSP VPRPDPQPPI LRIENVVKTF GSFRAVDGVS LDIRAGEFFA 
LLGPSGCGKT TLLRMLAGFE TPDEGRILLS GEDIAPVLPH QRPVNMMFQN YALFPHLNVR
DNIAFGLKRA GMPRGEIASR VAEMVALVRL EGLEKRKPDQ LSGGQKQRVA LARSLARRPK
VLLLDEPMAA LDKKLRESTQ FELMELQRKL GMTFIIVTHD QEEAMTVASR IGVMKAGQLE
QVAVPRRLYE EPASRWVAEF VGDINLFEGE VTAREALRLR VATSTAGELV VAQPVAPVAE
TKVAVAIRPE KIRLALRGPA ADAAAAAALN RVEGVITDAS YLGGKTVYKI RLDGGAVLHA
AQANTARLDA DGYGVNQRVV AWFTPDDCVV LER