Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6836 |
Symbol | potI |
ID | 5152959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7161255 |
End bp | 7162079 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561518 |
Product | putrescine ABC transporter membrane protein |
Protein accession | YP_001242629 |
Protein GI | 148258044 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.263779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGA TCACGGCACG GCCGTCCCGC CTGTCGCGCT TCAACGTCGC CTCGCTGACG CTCGGGCTCG CTTTCCTGTA TCTGCCGATC CTGATCCTGG TGATCTATTC GTTCAATGCC TCGCGCCTGG TCACGGTGTG GGGCGGCTGG TCGTTGCGCT GGTATCACGA GTTCTTCAAC GACCGCGCGA TGATCGATGC GGCCTGGATG AGCCTGCGTG TCGGCGCGAC CTCCGCGACC GCGGCGACGG TGTTGGGCAC GCTCGCGGCT GTCGCGCTGT CGCGCGGCCA GGGCTTTCGC GGCCGCATGC TGTTCTCCGG CATGCTGTAC GCGCCGCTGG TGATGCCGGA GGTGATCACC GGCCTGTCGC TGCTGTTGCT GTTCGTGGCG CTGGAGGCGG AGCGCGGCTT CTGGACGGTG ACCATCGCCC ACACCACCTT GACGATGTGC TTCGTCGCCG TGGTCGTGCA GTCTCGGCTG GTCTCGCTGG ACCGCAGCCT GGAGGAGGCC GCCATGGATC TCGGCTGCGA TCCGCTGCGG GCGTTCGTGT TGGTGACCCT GCCGCTGATC GCGCCGGCAG TGGTGGCGGG CTGGATGCTC GCCTTCACGC TGTCGCTCGA CGATCTCGTG ATCGCGAGCT TCACCACCGG GCCCGGCTCG GCAACCTTGC CGATCCGGAT CTATTCGGAG GTCCGGCTCG GGGTGAAGCC CGAGATCAAT GCGATCTGCA CCTTGGTGAT CGGGCTGATT GCCGTCGTGA TCGTCGTGGC GTCGTTGGCT TCAAAACTGT CGAGCGACCG CGGCGAGAGT GCAGCTCCGC TGTAG
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Protein sequence | MSVITARPSR LSRFNVASLT LGLAFLYLPI LILVIYSFNA SRLVTVWGGW SLRWYHEFFN DRAMIDAAWM SLRVGATSAT AATVLGTLAA VALSRGQGFR GRMLFSGMLY APLVMPEVIT GLSLLLLFVA LEAERGFWTV TIAHTTLTMC FVAVVVQSRL VSLDRSLEEA AMDLGCDPLR AFVLVTLPLI APAVVAGWML AFTLSLDDLV IASFTTGPGS ATLPIRIYSE VRLGVKPEIN AICTLVIGLI AVVIVVASLA SKLSSDRGES AAPL
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