Gene BBta_6836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6836 
SymbolpotI 
ID5152959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7161255 
End bp7162079 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID640561518 
Productputrescine ABC transporter membrane protein 
Protein accessionYP_001242629 
Protein GI148258044 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.263779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA TCACGGCACG GCCGTCCCGC CTGTCGCGCT TCAACGTCGC CTCGCTGACG 
CTCGGGCTCG CTTTCCTGTA TCTGCCGATC CTGATCCTGG TGATCTATTC GTTCAATGCC
TCGCGCCTGG TCACGGTGTG GGGCGGCTGG TCGTTGCGCT GGTATCACGA GTTCTTCAAC
GACCGCGCGA TGATCGATGC GGCCTGGATG AGCCTGCGTG TCGGCGCGAC CTCCGCGACC
GCGGCGACGG TGTTGGGCAC GCTCGCGGCT GTCGCGCTGT CGCGCGGCCA GGGCTTTCGC
GGCCGCATGC TGTTCTCCGG CATGCTGTAC GCGCCGCTGG TGATGCCGGA GGTGATCACC
GGCCTGTCGC TGCTGTTGCT GTTCGTGGCG CTGGAGGCGG AGCGCGGCTT CTGGACGGTG
ACCATCGCCC ACACCACCTT GACGATGTGC TTCGTCGCCG TGGTCGTGCA GTCTCGGCTG
GTCTCGCTGG ACCGCAGCCT GGAGGAGGCC GCCATGGATC TCGGCTGCGA TCCGCTGCGG
GCGTTCGTGT TGGTGACCCT GCCGCTGATC GCGCCGGCAG TGGTGGCGGG CTGGATGCTC
GCCTTCACGC TGTCGCTCGA CGATCTCGTG ATCGCGAGCT TCACCACCGG GCCCGGCTCG
GCAACCTTGC CGATCCGGAT CTATTCGGAG GTCCGGCTCG GGGTGAAGCC CGAGATCAAT
GCGATCTGCA CCTTGGTGAT CGGGCTGATT GCCGTCGTGA TCGTCGTGGC GTCGTTGGCT
TCAAAACTGT CGAGCGACCG CGGCGAGAGT GCAGCTCCGC TGTAG
 
Protein sequence
MSVITARPSR LSRFNVASLT LGLAFLYLPI LILVIYSFNA SRLVTVWGGW SLRWYHEFFN 
DRAMIDAAWM SLRVGATSAT AATVLGTLAA VALSRGQGFR GRMLFSGMLY APLVMPEVIT
GLSLLLLFVA LEAERGFWTV TIAHTTLTMC FVAVVVQSRL VSLDRSLEEA AMDLGCDPLR
AFVLVTLPLI APAVVAGWML AFTLSLDDLV IASFTTGPGS ATLPIRIYSE VRLGVKPEIN
AICTLVIGLI AVVIVVASLA SKLSSDRGES AAPL