Gene BBta_6834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6834 
Symbol 
ID5151410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7159177 
End bp7160028 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content62% 
IMG OID640561516 
Productputative ABC transporter permease protein 
Protein accessionYP_001242627 
Protein GI148258042 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.176531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTC CCACCCTCCG CGAAGTCGGC ACCGAGGCCC GGCTGCTGCT GATCGGCATT 
CCCGTCTTCA TCTGGACGAT GATCCCGATC TACCACATGT TCCTGTTCGC GATCTCGCCG
AAGGAGGACG CGTTCTCCGG CAAGCTGTGG CCGGATCATC CGACCCTGCA CAATTTCTCG
ATTGTGTTTC ACCAGCAGCA TTATTTCCTG CGCGACTTCT GGGTGCAGTT CGGCAACTCC
GTCGTGATCG CCGTCGCGGT GGGCGCGCTG ACCCTGATCA TCGCCACCTG CGCGGCCTAC
GCCATCTCGC GCCTGCGCGT GCCCGGCAGC CGCGTGGTGA TGAATCTCGC GCTGTTCACC
TATTTCATTC CGGCCGCATT CCTCGCCGTG CCGATGTATC GCACCATGGG CAAATACGGC
CTGCTCAACA ATGACTGGTC GCTAATCCTG GCGATGGTCA CGATCGCCTC GCCCTATGCG
ATCTGGGTGC TGAAGCAGGC CTCGGACAAG CTGCCGGTCG AACTGGACGA GGCCGCCGTG
ATGGACGGCG CGAGCCCGCT GCAAATCTTC CGCCTGGTCT ATGTGCCGCT GATGATGCCG
TCGCTGGTCG CGATCGGCAC CTATGCCGTG CTGTTGGCCT GGAACGAATA TCTCTACGCC
TTCCTGCTGC TCTCCAACGA CAAGGCGATC ACCTTGCCGG TGGCGCTCGG CAACTTCCTC
GCCGCCGACG ATTCGCCGTG GGAACTCCTG ATGACCACGG GCTTCATCTA CGCGCTGCCG
CCGGCTGCGG TCTATTATGC CTTCAAGCGC TACATGGTCG GCGGGCTGAC CGCGGGCGCC
GTGAAGTCGT GA
 
Protein sequence
MKLPTLREVG TEARLLLIGI PVFIWTMIPI YHMFLFAISP KEDAFSGKLW PDHPTLHNFS 
IVFHQQHYFL RDFWVQFGNS VVIAVAVGAL TLIIATCAAY AISRLRVPGS RVVMNLALFT
YFIPAAFLAV PMYRTMGKYG LLNNDWSLIL AMVTIASPYA IWVLKQASDK LPVELDEAAV
MDGASPLQIF RLVYVPLMMP SLVAIGTYAV LLAWNEYLYA FLLLSNDKAI TLPVALGNFL
AADDSPWELL MTTGFIYALP PAAVYYAFKR YMVGGLTAGA VKS