Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6831 |
Symbol | |
ID | 5151407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7154734 |
End bp | 7156671 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561513 |
Product | putative asmA protein, assembly of outer membrane proteins |
Protein accession | YP_001242624 |
Protein GI | 148258039 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0946528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGCC TCGGCACGCC GATTGCGGTG CTGCTTGGCG TCGCGTTTAT CGGGCTTTTC GTCAGTTCAT GGCTGGTGAA CCGCGACGCG TTGCGGCGGG CAGTAGAGAC GCAGATCCGC GCCGTCACCG GCCTCGAACT GGTCGTCAAG GGACACATCG ATGTCTCGCT GTTTCCGGGC AGCTATGTGT CGTTTCATGA CGTGGGCCTG AAGGGCGGCG GCACCGCAGA TCCCGCATTG CGCGTCGATG TGCTCACGGC CAATCTCCAG CTGCTGCCGC TGCTGTTGCA GCGGTTCGAG ATCGCCGATC TGATGCTGCT GCGGCCGCAG ATCAATGTGA TCCGCGAGGC CAATGGCAGC AGCAACTGGA CGCCCTTCAT CGCCACGATC GCACATACGA TGCGGCCTGG GCCGGACAGT CAGATGTCGT TCTCCGAGAT CCGGATCCAG GACGGCGTGC TGGTTTTCGA CGACAACGGC ACGCGCTCCC AGGAGCGGCT CGATGACATC GACCTGTCGC TGGCTTGGCC GTCGATTTCG CGCTCTTTCG CAGCCACCGG CCAGTTCGAC TGGCGCGGGC AGCGCATCGA AGGCTCGATC AGCGTCAGCG ACTTTCTCGC CGCGCTGTCG GGAGACCGCT CTGGACTGAA GATGCGGCTG GCCAGCCCGC CGCTGAAGGT CGCCTTCGAC GGGACGGTCG CGAACCGCAC CAGCGCCCTG ATGGAGGGCA CGCTGACGGT GGACAGCCCC TCGCTGCGCG AGGCGTTGCG CTGGACAGGC CAGACGCCGC TCGGCAGCGG CGGCTTCGGC CGCTTCGCGC TGCGCGCGCG CGCCAATGTG GTCGGTGCCT CGATCGCGCT CACCAATGTG AATGTCGAGC TCGACGGCAA CACCGCCGAG GGCGTGATGA CCTACGCCAA TAATGGACGG CAGGCGTTGC AGGCGACGCT CGCCGCCGAT GCGCTCGATT TCACACCCTA TATTTCCACC GTGCGGCTGC TCGCCAACGG CGCCCGCGAC TGGAACCGGC AGCTGTTCGA CCTCAAGGCG TTGTCGACGA CCGATCTCGA TATGCGGCTA TCCGCCGCAA AGGTCACCGT CGGCCCTTCG AAGCTCGGGC GGACCGCGTT CGGCGCCAAT CTGCGCAACG GCGTGCTCGC GCTCTCGGTC GGCGAAGCGC AGATGTATGG CGGCATCGTG CGCGGCTCGG TCGGCATTGC CCGCGCCGAC GCCGTCGCCG ACGTCAAGGC CGAGCTGCAA TTCGCCGATG TCGATCTGCA GTCCTGCGCC AACGAGCTGT TCGGCGTGTC GTCCATCTCG GGACGCGGCA ACCTGAATGT CTCGCTGACG GCGTCCGGGT CGAGCCCGTT CGGGCTGGCG CAATCGCTCG ACGGCAGCGC GACATTGCAA GGCCGCGACG GTTCGATCTC CGGCTTCAAT GTCGAGCAGC TGCTCAAGCG CCTGGAGCGC AGTCCGCTGT CGCGCGGCGG CAATTTCCGC TCCGGCTCGA CGCCCTATGA TTCATTGACG GTCGCGGTGA GGTTTTCCGA CGGCGTCGCA ACGGCCGAGG ATATCCGGGT CGAGAGTCCG ACAGCGCGGA TCACCATGAC CGGCACGGCC TCGGTTCCGA CCCGCGAATA TGACTTCAAG GGCGTTGCAA GCCTGTTGTC GTCAGGCAAC GGCGGCAATG GCTTCGAGCT GCCCTTCGTG GTGCAGGGCC CCTGGGAGGA TCCGCTCATC TTCCCCGATC CCGAAAGCCT GATCCGCCGC GCCCCTGCGG CCGCGCCGCT GCTCGACGCC GTCAAGGACC GCAAGACGCG AGATGCCATC AACTCGGTGC TCAAGCGGTT CACCGGCGGC GGACTGTCGC CTAGCCAGCA GGACACCCCT CCGCCGCAGG CTGACGCGCC GGCAGGCAGT CCCGCCAAAC AGAACTGA
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Protein sequence | MRRLGTPIAV LLGVAFIGLF VSSWLVNRDA LRRAVETQIR AVTGLELVVK GHIDVSLFPG SYVSFHDVGL KGGGTADPAL RVDVLTANLQ LLPLLLQRFE IADLMLLRPQ INVIREANGS SNWTPFIATI AHTMRPGPDS QMSFSEIRIQ DGVLVFDDNG TRSQERLDDI DLSLAWPSIS RSFAATGQFD WRGQRIEGSI SVSDFLAALS GDRSGLKMRL ASPPLKVAFD GTVANRTSAL MEGTLTVDSP SLREALRWTG QTPLGSGGFG RFALRARANV VGASIALTNV NVELDGNTAE GVMTYANNGR QALQATLAAD ALDFTPYIST VRLLANGARD WNRQLFDLKA LSTTDLDMRL SAAKVTVGPS KLGRTAFGAN LRNGVLALSV GEAQMYGGIV RGSVGIARAD AVADVKAELQ FADVDLQSCA NELFGVSSIS GRGNLNVSLT ASGSSPFGLA QSLDGSATLQ GRDGSISGFN VEQLLKRLER SPLSRGGNFR SGSTPYDSLT VAVRFSDGVA TAEDIRVESP TARITMTGTA SVPTREYDFK GVASLLSSGN GGNGFELPFV VQGPWEDPLI FPDPESLIRR APAAAPLLDA VKDRKTRDAI NSVLKRFTGG GLSPSQQDTP PPQADAPAGS PAKQN
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