| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6820 |
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| Symbol | |
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| ID | 5152855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7141607 |
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| End bp | 7144552 |
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| Gene Length | 2946 bp |
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| Protein Length | 981 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640561502 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001242613 |
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| Protein GI | 148258028 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0915227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACG CCGATTTCGA GTTGCAGGCC TTGAGCGACC CCCGGCTGGC CGTCCATGCC
GCGGGCAGCC TGCCGGCATG GCTGTGGTCG GCGGACGGCA GTCGCGTATT GTGGGCCAAC
GCCATGGCTG CGCGGGCTCT CGGTGCAGCC AACAGTTGGG CCCTGGTCGA CAAGAGGTTC
GGACCGGCCG ATCAGCACCG CCGTCAAGTG GCTCAGCTGG CGCGCCGGCT GCCGGAAAAT
GGCGCCATCC GACTCGAGCG CCTGCGCGGG TTCGGCGCGC CGCTCGGCGC GCTTGCGACG
TGCGGTTGCG CAATGATCGA CCTGCCGGAC GGCATGCGCG CCGTCCTGAT CACCGGCACG
GACAACAGCG GCCGCAGCTG GCCGCTGACG GAGCGCCTGA GGCGGCTTGT CGAGAACAGC
GGTCTCGCGC TGATCGCCTT CACCGCGCAT GGCGAGTTCG CCGGCATCAG TACAGCCGGA
CGGCGCCTGT TCGGCATCCA CGACCTCAGC GCGCCGCTGT TTGCGGATGT CCGCAACGAG
GCGCTGACCG CAGGCTTCGC CGAGATACAG TTCGGCGACG AGCGCGCCGT GCTCCACCGG
GTCGGCGCTG GCAGCCAAAT CGGGCTGGTC GCAGTCCCGG CGCCCGCCCC GGCCGTCAAG
CAAGCGGAGC CGAACGCCGA CGTGCCCGTT GACGCCGTCC CTGTCGCCGA GACGGCTGCA
ACACCTCCCC ACCCCGCCAA TCCTGCCCCC GAGGTCGCGG CCGAGTGTCC GCCTCCTCCC
TCGATGGATG CAATGACTGA ACGCCCGTTG GACGACGAGA CATCAGCGCA ATCGCGCGAA
GCGGCTGCCG CATTCGCTCC GCTCGACGAA CCCGCCGTGC AGGCGCCGCC GGTCGTCGGC
ATCGACCGCC CGGAGCCAAC GTCTTCCATC GCGGCCGAGA CGGCTGACGC TGACGCGACG
GCTTTTGCGC AATCCGACCT TGCGCCGGCC GCAGATGCGC CGCCACAGCA GGACAACATC
ACCGTGTCGA CCCGTGACGC GTCCGTCGCG TCGGACGCGC CTCCCATCGA CAATGGTGGG
CTCGAAGCGG CGGGCAATGT CGTGCCTTTC CGCCCAGCCG GCGAAACCAA ACATCCGGCG
CTGACGCCGG TGGAGAACAA TGCCTTCCAT GAGCTCGCGC GCCAGCTGTC GGCAAGGCTT
GAAGGCGACA ACCGCAATGC GCCGGCGGAC GCGGCAGCGG CGACGCATGA GCCGGCGGCG
CAAGTGACCG AACCATTCGA CGCGCCGCAT GTCCCCACGT CATTGCTCGG CAGCGATGCG
AGCGATCAGC CCACAGCCGG GCTGCAGGCC GAGTGGCTCA CGCCCGAGCA ACCGCCCGCC
CAAGGCGACA GCCAGCGTGA CCGCATCCTG CTGGATCTGC TGCCGACGGG AATGCTGATC
TATCGGCTTG ACCGCCTGCT CTATGCCAAT CCGGCATTTT TCAAGCAGAT GGGCTACACC
GATCTCGCGA CTCTGGAGCA GGCCGGGGGC CTCGATGCGC TCTATGTCGA ACCCGGCGCG
CCCGCCGGCT CTGGCAAGCC CGAGGTCGGC ACGCCGGTGA CGATCTCGGC GGCCGACGGC
TCCTCCAGCG AGGAGATCAA AGCCGAGGCG CGTCTGTTCA CGATCACCTG GGACGGCGAC
AGCGCGCATG CGCTGATCTT CGCGCCCGCA CCTGGCCCGG CGGCCACCGC CGTGTCCGCT
CCGGCCGAGA CCGGATCGGC CCCCGCTCCT GCACCGGCCG CACCGGCGCC GCTGGTCCTC
GCGCCGCCGC CCGTCGCCGG TCATGCCGAC GCGGAAGATC TCGCCGCCAT CCTTGACGTC
ACCGCGGAGG GCATCCTGAT GTTCGATGCT GGCGGCAATA TCCACGCCTG CAATCGCAGT
GCCGAGGCCA TGTTCGGCTA TGACGGAACG GAGCTCGTCC GCCGCAACAT CATCGAATTG
TTCGCGCCGG AAAGCGCAAG GCTGGTGCTG GATCATCTCG ACCGTGTGCA GCAGGCGGGG
ACCGCCAATG TGCCGGAGCC GAGCCGCGAA GTCTTGGGCA AGGTCGCCCA GGGCGGCGCC
ATCCCGCTGT CGATGACGAT CGGCCGGACC AGACAAGACG GTCCGAATTT CTTTGCCGTG
TTCCGCGACC TGTCGCAGCT TCGTCGCGGT GAAAGCGAGT TGCTGCAGGC GCGGCGCGTC
GCCGATCGCG CCGCCAGCGC CAAGGCCGAC ATGCTCGCGC GGATCAGCCA CGAAGTGCGG
GCCCCGCTCA ACGCCATCAT CGGATTTGCC GAGGTGATGA TCGGCGAACG CTTTGGAACG
CTCGGCAACA CGCGCTACGC CGAGTACATG AAGGATATCC GCGCGTCCGG CGAGCGCGTG
GTGTCGCTGA TCGACGATCT GCTCGAATTG TCGCGCATCG AGACCGGCAG ACTGGAGCTT
GCCTTCACCA GCCAGAATCT GAATGAGCTC GTCGAGGGCT GTGTGGCGGT GATGCAGCCG
CACGCCAACC GCGCCCGCAT CATCATCCGC ACCTCGCTGT CGCAGAGCCT TCCGCCGGTC
ATCGCCGATG CCAGGGCGCT GCGCCAGATC GCCATGAACC TGATCTCGAC CTCGATCTCG
CTCGCCAATG CCGGCGGCCA AGTCATCGTC TCCACGGCGA CGTCGGATTT TGGCGAGGTG
GTGCTGCGCG TGCGCGACAC TGGCCACGGT CTCAACGACC AGGCGGTGGC CGCCGCGCTC
GAACCGTTCC GCGCGACGGC GGGGCCCGAG CAAGGCCATG ACGGCTCGGG TCTCAGCCTC
TCTCTCACCA AGGCGCTGGT CGAGGCCAAT CGCGCGCAGT TTCACATCAA GGCGGCGCCG
AAATCCGGCA CCTTGCTCGA GGTGGTGTTC TCGCGCGCGG TGGCGCGCAA TCAGAGCACC
GCCTGA
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| Protein sequence | MNHADFELQA LSDPRLAVHA AGSLPAWLWS ADGSRVLWAN AMAARALGAA NSWALVDKRF
GPADQHRRQV AQLARRLPEN GAIRLERLRG FGAPLGALAT CGCAMIDLPD GMRAVLITGT
DNSGRSWPLT ERLRRLVENS GLALIAFTAH GEFAGISTAG RRLFGIHDLS APLFADVRNE
ALTAGFAEIQ FGDERAVLHR VGAGSQIGLV AVPAPAPAVK QAEPNADVPV DAVPVAETAA
TPPHPANPAP EVAAECPPPP SMDAMTERPL DDETSAQSRE AAAAFAPLDE PAVQAPPVVG
IDRPEPTSSI AAETADADAT AFAQSDLAPA ADAPPQQDNI TVSTRDASVA SDAPPIDNGG
LEAAGNVVPF RPAGETKHPA LTPVENNAFH ELARQLSARL EGDNRNAPAD AAAATHEPAA
QVTEPFDAPH VPTSLLGSDA SDQPTAGLQA EWLTPEQPPA QGDSQRDRIL LDLLPTGMLI
YRLDRLLYAN PAFFKQMGYT DLATLEQAGG LDALYVEPGA PAGSGKPEVG TPVTISAADG
SSSEEIKAEA RLFTITWDGD SAHALIFAPA PGPAATAVSA PAETGSAPAP APAAPAPLVL
APPPVAGHAD AEDLAAILDV TAEGILMFDA GGNIHACNRS AEAMFGYDGT ELVRRNIIEL
FAPESARLVL DHLDRVQQAG TANVPEPSRE VLGKVAQGGA IPLSMTIGRT RQDGPNFFAV
FRDLSQLRRG ESELLQARRV ADRAASAKAD MLARISHEVR APLNAIIGFA EVMIGERFGT
LGNTRYAEYM KDIRASGERV VSLIDDLLEL SRIETGRLEL AFTSQNLNEL VEGCVAVMQP
HANRARIIIR TSLSQSLPPV IADARALRQI AMNLISTSIS LANAGGQVIV STATSDFGEV
VLRVRDTGHG LNDQAVAAAL EPFRATAGPE QGHDGSGLSL SLTKALVEAN RAQFHIKAAP
KSGTLLEVVF SRAVARNQST A
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