Gene BBta_6788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6788 
Symbol 
ID5154033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7069152 
End bp7069895 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID640561471 
Producthypothetical protein 
Protein accessionYP_001242584 
Protein GI148257999 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.101471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0851978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCGCC GCATCACCAC GGCCGATATT GCCGAGGCCC TGACGCAGGG CCTGCGCGAC 
TTTCAGGCGC AGCCGCTGTT CGGCCTCGCT TTCGGCCTGA TCTATGTGCT TGGCGGTATC
AGCATCGTGC TGTGTGTCAC CGCCTTCGGC ATGGTCTATC TCGCTTATCC CTTGGCCGCG
GGCTTTGCGT TGATCGGCCC GTTCGTCGCC ATCGGCCTCT ACGAGGTCAG CCGCCGCCGC
GAGCTTGGTC AGCCGATCTC CTATGGAGCG ATCCTGCGCA CCGTCACCTC GCGTGGCGAG
ATCGGGTGGA TGGCGTTCGT CACGCTGTTC TTCTTCGTCA TCTGGATGTA CCAGGTGCGC
CTCCTGATCG CGCTGCTGCT CGGGCTCAAT GCCTCTTTCT CCAGCATCAA GGAGTTCATG
ACGGTGGTGC TGACGACCAA TGAGGGCCTG CTGTTCCTCG TGATCGGCAA TCTCGACGGC
GCGGCGCTGT CGCTGGTGCT GTTCTCGCTC ACCGTGGTGT CGTTTCCGCT CCTGCTCGAT
CGCGACGTCG ATTTCGTCAC CGCGATGATC ACCAGCGTGC GGGCGGTGGT GGCCAGTCCC
GGACCGATGA TCGGCTGGGC CGCCATCATC ACCGTGCTGC TGATCATCTC GGCGCTGCCT
TATTTCCTCG GGCTGCTGGT GACCGTGCCC GTTCTGGGCC ATGCGACCTG GCACCTCTAT
CGCCGCATCG TCGCGCCAGC CTGA
 
Protein sequence
MVRRITTADI AEALTQGLRD FQAQPLFGLA FGLIYVLGGI SIVLCVTAFG MVYLAYPLAA 
GFALIGPFVA IGLYEVSRRR ELGQPISYGA ILRTVTSRGE IGWMAFVTLF FFVIWMYQVR
LLIALLLGLN ASFSSIKEFM TVVLTTNEGL LFLVIGNLDG AALSLVLFSL TVVSFPLLLD
RDVDFVTAMI TSVRAVVASP GPMIGWAAII TVLLIISALP YFLGLLVTVP VLGHATWHLY
RRIVAPA