Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6788 |
Symbol | |
ID | 5154033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7069152 |
End bp | 7069895 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640561471 |
Product | hypothetical protein |
Protein accession | YP_001242584 |
Protein GI | 148257999 |
COG category | [S] Function unknown |
COG ID | [COG5473] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.101471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0851978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGCGCC GCATCACCAC GGCCGATATT GCCGAGGCCC TGACGCAGGG CCTGCGCGAC TTTCAGGCGC AGCCGCTGTT CGGCCTCGCT TTCGGCCTGA TCTATGTGCT TGGCGGTATC AGCATCGTGC TGTGTGTCAC CGCCTTCGGC ATGGTCTATC TCGCTTATCC CTTGGCCGCG GGCTTTGCGT TGATCGGCCC GTTCGTCGCC ATCGGCCTCT ACGAGGTCAG CCGCCGCCGC GAGCTTGGTC AGCCGATCTC CTATGGAGCG ATCCTGCGCA CCGTCACCTC GCGTGGCGAG ATCGGGTGGA TGGCGTTCGT CACGCTGTTC TTCTTCGTCA TCTGGATGTA CCAGGTGCGC CTCCTGATCG CGCTGCTGCT CGGGCTCAAT GCCTCTTTCT CCAGCATCAA GGAGTTCATG ACGGTGGTGC TGACGACCAA TGAGGGCCTG CTGTTCCTCG TGATCGGCAA TCTCGACGGC GCGGCGCTGT CGCTGGTGCT GTTCTCGCTC ACCGTGGTGT CGTTTCCGCT CCTGCTCGAT CGCGACGTCG ATTTCGTCAC CGCGATGATC ACCAGCGTGC GGGCGGTGGT GGCCAGTCCC GGACCGATGA TCGGCTGGGC CGCCATCATC ACCGTGCTGC TGATCATCTC GGCGCTGCCT TATTTCCTCG GGCTGCTGGT GACCGTGCCC GTTCTGGGCC ATGCGACCTG GCACCTCTAT CGCCGCATCG TCGCGCCAGC CTGA
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Protein sequence | MVRRITTADI AEALTQGLRD FQAQPLFGLA FGLIYVLGGI SIVLCVTAFG MVYLAYPLAA GFALIGPFVA IGLYEVSRRR ELGQPISYGA ILRTVTSRGE IGWMAFVTLF FFVIWMYQVR LLIALLLGLN ASFSSIKEFM TVVLTTNEGL LFLVIGNLDG AALSLVLFSL TVVSFPLLLD RDVDFVTAMI TSVRAVVASP GPMIGWAAII TVLLIISALP YFLGLLVTVP VLGHATWHLY RRIVAPA
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