Gene BBta_6768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6768 
Symbol 
ID5153046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7049407 
End bp7050225 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content66% 
IMG OID640561451 
Producthypothetical protein 
Protein accessionYP_001242564 
Protein GI148257979 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0634342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTGC GTCGTCTTGC CGTGCTGCTC GCGGCCTCGC TCTCGGCCCT CTCGGCGGCC 
AGCTCCGCGC AGGCCGCGCG CTGCGGCGGT GATTTCAACA CGTTCGTTGC CAGCTTCTCC
GCAGAGGCGC AGAGCGCCGG CGTCTCGTCC GCAACGATCA GCCAGGCGCT GTCGGGCGTG
ACGCTCGATC CGGCCGTGCT CGCCTTCGAC CGCCGCCAGC GTTACACCTT CAACAAGAGC
TTCGAGCAGT ATGTCGCGAC CCGCGTCGGC CCCGGCCGCA TCAATGGCGG CCGCGCGATG
CTGCAGCGGC ATGCGGCGCT GCTGTCGCGC ATCGAGCAGC AATATGGCGT GCCGCGCCAG
ATCCTGATCG CGATCTGGGG GCTGGAAACC GATTTCGGCA AGGGCGACAT GGGCAAGCTG
CCGGTGATCC GTACGTTGGC GACCCTGGCG CATGATTGCC GCCGCACCGA GCTGTTCCAG
ACCGAGCTGA TGGCGGCGCT GAAGATCGTC GAGCGCGGCG ATCTCACTTT GCGCGATCTG
ATCGGTGCCT TCGCCGGCGA GATCGGCCAG ACCCAGTTCC TGCCGTCCTC CTACATCAAA
TACGGCGTCG ATTTCGATGG CGACGGCCGC GTCGATCTGC GTCACTCCAC CGCCGACGTG
CTGGCCTCGA CCGCCAATCT GCTCCACAGC AACGGCTTCA AGATGGGCGC GCCCTATGAC
GAGGGCTCGG CGAATTTCGA CGCGATGCGC GAGTGGAACA GGGCTGTGAT CTATCGCAAG
ACCATCGGCT ATTTCGCCGA TCAGCTGGTG GGGCGATAG
 
Protein sequence
MLLRRLAVLL AASLSALSAA SSAQAARCGG DFNTFVASFS AEAQSAGVSS ATISQALSGV 
TLDPAVLAFD RRQRYTFNKS FEQYVATRVG PGRINGGRAM LQRHAALLSR IEQQYGVPRQ
ILIAIWGLET DFGKGDMGKL PVIRTLATLA HDCRRTELFQ TELMAALKIV ERGDLTLRDL
IGAFAGEIGQ TQFLPSSYIK YGVDFDGDGR VDLRHSTADV LASTANLLHS NGFKMGAPYD
EGSANFDAMR EWNRAVIYRK TIGYFADQLV GR