| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6759 |
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| Symbol | rluD |
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| ID | 5154111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7042561 |
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| End bp | 7043541 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640561443 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_001242556 |
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| Protein GI | 148257971 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTCA TTGTCGCCGG CGACGAAGGC TCGCCGCGGC TCGATCGCGT GCTCGCGGCC
CGGCTGCCGG AGCTGTCGCG GTCCCGGCTG AAGGCGCTGA TCCTGGCCGG CCAGGTCAGC
CTCAGCACCG GGGCGGTGCG CGACCCCGCT TATCACGTCG CCAGCGGCGA CACGATCACA
ATCGACGTGC CCGAAGCGGC CCCGCCCGAG CCGAAGGCCG AGGCGATCCC GCTCCACGTC
GTCTACGAGG ACGACGATAT CGTCGTCCTC GACAAGCCGG CCGGCCTCGT GGTGCATCCC
GCCGCCGGGC ACGAAACCGG GACCCTGGTG AACGCGCTGA TCGCGCATTG CGGCGCCAGC
CTGTCCGGGA TCGGCGGCGT CAAGCGGCCC GGCATCGTCC ACCGGCTGGA CAAGGATACC
ACCGGGCTGA TGGTGGTCGC CAAGAACGAT CACGCGCACG CCTCGCTGAG CGCGCAGTTC
GCCGATCACG GCCGCACCGG CGCGATGGAG CGCGGCTATC TGGCGTTTTC CTGGGGGCTG
CCGCACCGGC CGCATGGCAC CATCAACGCC CCGCTTGACC GGCATCCGCA TGCCCGCGAC
AAGATGGCGG TGCGGCCACG GGGCCGCGAG GCCATCACCC ATTACGAGGT GCAGGAGAGC
TTTGTCGGCC GCGACGGCAA GCCGGTGGCG TCGCTGATCG CCTGCCATCT CGAGACCGGG
CGCACCCACC AGATCCGGGT GCATCTGGCG CATCTCGGCC ATACCCTGCT CGGCGATGCC
GTCTATGGCC CGCACTTCAA GACCAAGGCG AACCAGCTGG CGCCAGGCGC GCGGGCGGCG
CTGGAGGCGC TCGGACGGCA GGCGCTGCAT GCCTATCTGC TGGTGATCGA GCACCCCCGG
ACGGGAGAAA TTCTGCGCTG GGAATCGGAG CTGCCGGAGG ATCTTTCCCT CTTGCGGGAG
GCGCTGCGAG CGGCGCTATG A
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| Protein sequence | MTVIVAGDEG SPRLDRVLAA RLPELSRSRL KALILAGQVS LSTGAVRDPA YHVASGDTIT
IDVPEAAPPE PKAEAIPLHV VYEDDDIVVL DKPAGLVVHP AAGHETGTLV NALIAHCGAS
LSGIGGVKRP GIVHRLDKDT TGLMVVAKND HAHASLSAQF ADHGRTGAME RGYLAFSWGL
PHRPHGTINA PLDRHPHARD KMAVRPRGRE AITHYEVQES FVGRDGKPVA SLIACHLETG
RTHQIRVHLA HLGHTLLGDA VYGPHFKTKA NQLAPGARAA LEALGRQALH AYLLVIEHPR
TGEILRWESE LPEDLSLLRE ALRAAL
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