Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6744 |
Symbol | |
ID | 5151875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7029039 |
End bp | 7030187 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640561429 |
Product | putative phage integrase |
Protein accession | YP_001242543 |
Protein GI | 148257958 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.15121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGAA GGTTGCCGCC ATACGTTGAG CGCAATCACG TCAAGGGGCA TACCTACCTG TCATTTCGGC GCGGCAAGGG TGCGCGCATT CGCCTGCCAG ATGACCCGAC CAGCTCTGAG TTCATGTCGG CCTATCAAAG CGCCCTTCTC GGTCAGGCGA CATCATCGAG ACCCGAACTT CGCTCTCCCG TTCACGGCAC AATTTCCGCG CTGATCGCGT CTTACATGCG AAGCTCGGAT TATATCGGCC TTCGAAAGAC CAGCAAGGAG GGGTACGGCA GACGCCTCGA GGCCCTCAGA ATCGAGCACG GGCATCGGAC AGTCGCTGGA CTTTCTCGCG AGCGCATCAT CACCGGCATT CTTCAGCCGT TCGCCGACCG GCCCGGCGCG GCTCTCGATA CTCTCAAGAA ACTTCGCATT TTGATCCGTC ACGCAATCAA CATCGGATGG ATCAAGCACG ATCCGTCGGT CGGGATAAAG CGCCCCAAGC TTCAGCGCAT CAGATCTTGG ACCGAGGACG AGATCGAGCT TTTCCGCAAG AAGTGGCCTC TGGAAACCAA ACAGCGGCTG GCCTTCGAAC TGTTCCTGAA CACGGGTCAA CGACGATCGG ACGTGGTCCG CATGGCGTGG TCCCACATCA CGCCCGAAAA CAGAATCGCC GTCGCGCAGC AGGAGACAGG ACGGCGCTTG TTGATTCCGC TACACCGTGA CCTGCTTTCG GCCTTGGCGG TCGCAAAGCG TGACCACATG TCGATCATCA CGACCGCCTA CGGCCAGTCC TTCAGCGTCG ACGGCTTCAG CCAATGGATG CGCGACGCGA TCACTGACGC TGGCCTGCCG CTCGGTTGTC AGCCGCACGG CCTGCGCAAG GCAACCGGCC GTCGCCTAGC TGAGGCTGGA GCGACGGCAA AGATGATCAT GTCCGTCCTT GGCCACACCA CTCTTGCGGA GGCCGAGCGA TACACTGAGG AGGCTGATCA GGCGAGCCTT GCGGTCGATG CTGTGGCGCG CCTTGAGGGA CACAAGGCGA ACGACTTTCC CCAAACGCAA TCTGCCGGTT TGGGAAAACC GACTAAAAAG CCAAAGAAAT CAGAGGGGGT GAGGCAGAAC TGGCGCTCCC TAGGGGAGGG CGCGGGCGAG GCGCTATGA
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Protein sequence | MPRRLPPYVE RNHVKGHTYL SFRRGKGARI RLPDDPTSSE FMSAYQSALL GQATSSRPEL RSPVHGTISA LIASYMRSSD YIGLRKTSKE GYGRRLEALR IEHGHRTVAG LSRERIITGI LQPFADRPGA ALDTLKKLRI LIRHAINIGW IKHDPSVGIK RPKLQRIRSW TEDEIELFRK KWPLETKQRL AFELFLNTGQ RRSDVVRMAW SHITPENRIA VAQQETGRRL LIPLHRDLLS ALAVAKRDHM SIITTAYGQS FSVDGFSQWM RDAITDAGLP LGCQPHGLRK ATGRRLAEAG ATAKMIMSVL GHTTLAEAER YTEEADQASL AVDAVARLEG HKANDFPQTQ SAGLGKPTKK PKKSEGVRQN WRSLGEGAGE AL
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