Gene BBta_6744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6744 
Symbol 
ID5151875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7029039 
End bp7030187 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content60% 
IMG OID640561429 
Productputative phage integrase 
Protein accessionYP_001242543 
Protein GI148257958 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.15121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGAA GGTTGCCGCC ATACGTTGAG CGCAATCACG TCAAGGGGCA TACCTACCTG 
TCATTTCGGC GCGGCAAGGG TGCGCGCATT CGCCTGCCAG ATGACCCGAC CAGCTCTGAG
TTCATGTCGG CCTATCAAAG CGCCCTTCTC GGTCAGGCGA CATCATCGAG ACCCGAACTT
CGCTCTCCCG TTCACGGCAC AATTTCCGCG CTGATCGCGT CTTACATGCG AAGCTCGGAT
TATATCGGCC TTCGAAAGAC CAGCAAGGAG GGGTACGGCA GACGCCTCGA GGCCCTCAGA
ATCGAGCACG GGCATCGGAC AGTCGCTGGA CTTTCTCGCG AGCGCATCAT CACCGGCATT
CTTCAGCCGT TCGCCGACCG GCCCGGCGCG GCTCTCGATA CTCTCAAGAA ACTTCGCATT
TTGATCCGTC ACGCAATCAA CATCGGATGG ATCAAGCACG ATCCGTCGGT CGGGATAAAG
CGCCCCAAGC TTCAGCGCAT CAGATCTTGG ACCGAGGACG AGATCGAGCT TTTCCGCAAG
AAGTGGCCTC TGGAAACCAA ACAGCGGCTG GCCTTCGAAC TGTTCCTGAA CACGGGTCAA
CGACGATCGG ACGTGGTCCG CATGGCGTGG TCCCACATCA CGCCCGAAAA CAGAATCGCC
GTCGCGCAGC AGGAGACAGG ACGGCGCTTG TTGATTCCGC TACACCGTGA CCTGCTTTCG
GCCTTGGCGG TCGCAAAGCG TGACCACATG TCGATCATCA CGACCGCCTA CGGCCAGTCC
TTCAGCGTCG ACGGCTTCAG CCAATGGATG CGCGACGCGA TCACTGACGC TGGCCTGCCG
CTCGGTTGTC AGCCGCACGG CCTGCGCAAG GCAACCGGCC GTCGCCTAGC TGAGGCTGGA
GCGACGGCAA AGATGATCAT GTCCGTCCTT GGCCACACCA CTCTTGCGGA GGCCGAGCGA
TACACTGAGG AGGCTGATCA GGCGAGCCTT GCGGTCGATG CTGTGGCGCG CCTTGAGGGA
CACAAGGCGA ACGACTTTCC CCAAACGCAA TCTGCCGGTT TGGGAAAACC GACTAAAAAG
CCAAAGAAAT CAGAGGGGGT GAGGCAGAAC TGGCGCTCCC TAGGGGAGGG CGCGGGCGAG
GCGCTATGA
 
Protein sequence
MPRRLPPYVE RNHVKGHTYL SFRRGKGARI RLPDDPTSSE FMSAYQSALL GQATSSRPEL 
RSPVHGTISA LIASYMRSSD YIGLRKTSKE GYGRRLEALR IEHGHRTVAG LSRERIITGI
LQPFADRPGA ALDTLKKLRI LIRHAINIGW IKHDPSVGIK RPKLQRIRSW TEDEIELFRK
KWPLETKQRL AFELFLNTGQ RRSDVVRMAW SHITPENRIA VAQQETGRRL LIPLHRDLLS
ALAVAKRDHM SIITTAYGQS FSVDGFSQWM RDAITDAGLP LGCQPHGLRK ATGRRLAEAG
ATAKMIMSVL GHTTLAEAER YTEEADQASL AVDAVARLEG HKANDFPQTQ SAGLGKPTKK
PKKSEGVRQN WRSLGEGAGE AL