Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6710 |
Symbol | rbsA |
ID | 5155793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6990661 |
End bp | 6992184 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561398 |
Product | ABC transporter, ATP binding subunit (putative high-affinity D-ribose transport) |
Protein accession | YP_001242512 |
Protein GI | 148257927 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.11533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0914748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGTC CGATCCTCGA GATGCGCGGG GTGTCGAAAT CATTCTTCGG CATCAAGGCC CTGCAGAAGG TCGATCTGAC CGTCTATGCC GGTGAAGTCC ATGCTCTGAT GGGCGAAAAC GGCGCCGGCA AATCCACGCT CATGAAGATT CTCTCCGGCG CCTATCGGCC CGATCCGGGC GGCGAGATCC GGATCGACGG GCACCCGGTG CGCATCGAGG GACCGCTCGG CGGCCGCGCC GCGGGCATTT CCATCATCTA CCAGGAGTTG TCACTGGCGC CAAACTTGAC GGTCGCGGAG AATATCTATC TCGGCCGCGA AGTGTCGCAA TCGGGCCTGT TGGCACGCGG GGCGATGCGC GAGGGCGTCG GTCCGATCCT GACGCGGCTG GGTGCTGATT TTGCAGCCTC GACGCTGGTC GCCGAGCTGT CGATGGGCCA GCGCCAGCTG GTCGAGATCG CCCGCGCGCT GCATGCGCGC TCCAAGATCC TGATCATGGA CGAGCCGACC ACATCGCTCT CGGCCGGCGA GAGCGAGAAA CTGTTCGCGC TGATCCGCCA GCTGCGCGCC GAAGGGCTCG CGATCATCTA TATCTCGCAC CGCATGGACG AGGTCTATGC GCTCGGCGAC CGCGTCACCG TGCTGCGCGA CGGCCGCCTC GTCGGCTCGC TGGATAAGCC GGAGATCCGC GCCGACAGCA TCGTCCGCAT GATGGTCGGA CGCGACGTGT CGTCGTTCTA CAAGAAGGAT CACGATCCGC ATGCCAAGCG CGACCGCCCG GTGCTCACCG CGGTCGATCT CGGCGACGGC CATCGCGTCA AGGGCTGCTC GCTCACCGTG CATGCCGGCG AGGTCGTCGG CCTCGCCGGG CTGATCGGCG CCGGGCGCAC CGAGCTCGCT CATCTGATCA TCGGCGCCAC GCCGAAGATG ACCGGCCATG TCACGCTCGA CGGCGAGCGG ATCGAGATCG AGACGCCGCG CGACGCGCTT GACGCCGGCA TCGCCTATCT CACCGAGGAC CGCAAGGCGC TCGGCCTGTT CCTCGACATG TCCTGCGCCG ACAACATCAA CCTCGCAGTG ATCGGGCGCG ATGCGCGACT CGGCGGCGTT CTGGATCGCG ACAAAGCGCG CCTGCGGGCC GACGAGGCGT TCAGCGCGCT CGGCATCCGG GCGCCCAATC CGGGCGTCAC TGTCGGCGGC CTGTCGGGCG GCAACCAGCA GAAGGTGCTG CTGTCGCGCC TGCTCGCAAC CGCGCCGAAA GTGCTGATCC TGGACGAGCC GACGCGCGGC GTCGACGTCG GGGCCAAGTC CGAGATCTAT TCGATCATCG ACAATCTCGC CAAGTCGGGT ACCGCGATCC TGGTGATCTC CTCCGACCTG CCCGAGATTC TCGGCATCTG CGACCGCGTG CTGGTGATGC GCTGCGGCCA ACTCGCCGGC GAGCTGCAAC AGAGCGCAAC AACTCCCATC ACCCAGGAAG ACATCATGGC ACTGGCCACC GGGACGGAGC ACGTCCATGC CTGA
|
Protein sequence | MSGPILEMRG VSKSFFGIKA LQKVDLTVYA GEVHALMGEN GAGKSTLMKI LSGAYRPDPG GEIRIDGHPV RIEGPLGGRA AGISIIYQEL SLAPNLTVAE NIYLGREVSQ SGLLARGAMR EGVGPILTRL GADFAASTLV AELSMGQRQL VEIARALHAR SKILIMDEPT TSLSAGESEK LFALIRQLRA EGLAIIYISH RMDEVYALGD RVTVLRDGRL VGSLDKPEIR ADSIVRMMVG RDVSSFYKKD HDPHAKRDRP VLTAVDLGDG HRVKGCSLTV HAGEVVGLAG LIGAGRTELA HLIIGATPKM TGHVTLDGER IEIETPRDAL DAGIAYLTED RKALGLFLDM SCADNINLAV IGRDARLGGV LDRDKARLRA DEAFSALGIR APNPGVTVGG LSGGNQQKVL LSRLLATAPK VLILDEPTRG VDVGAKSEIY SIIDNLAKSG TAILVISSDL PEILGICDRV LVMRCGQLAG ELQQSATTPI TQEDIMALAT GTEHVHA
|
| |