| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6709 |
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| Symbol | xylB |
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| ID | 5155792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6989061 |
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| End bp | 6990506 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640561397 |
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| Product | xylulokinase (xylulose kinase) |
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| Protein accession | YP_001242511 |
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| Protein GI | 148257926 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.566746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0890509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATCTCG GCATCGATCT CGGCACGTCG GCAGTCAAGA CGATTCTTGT CGACGATGCC
CAGCGCGTGG TCGCGAGCCG CAGCCACAAT CTGACAATCG ACTCTCCCCG CGCCGGCTGG
GCGGAGCAGG ATCCCGGCGC ATGGATCGCC GCGGTGTTCG CGACCTTGGA TGCGCTCAAG
GCCGATCATG CCGGCGCACT GGCCGAGGTC GACGGCATCG GCCTGTCCGG CCAGATGCAC
GGGCCGGTGC TGCTCGACGC CGGCATGACG CCCCTGCGAT CCTGCATCCT CTGGAACGAC
GGCCGCGCGG CGGCCGAATG CGCTGTGCTG GAACAGCGCT GGCCCGCGTT GCGCCAGGTC
ACCGGCAACA AGGCGATGCC CGGCTTCGCC GCCCCGAAGC TGGTATGGAT TGCGAACCAC
GAGAAGGCGA TCTTCGACGC CATCCACCTC GTGCTGCTGC CGAAGGCCTA TGTCCGGCTC
GTGCTTTCAG GCGAGGCGAT CGAGGACGTT TCCGACGCGT CGGGCTCGCT GTGGCTCGAT
GTCCATAAGC GGGATTGGTC GGACGCGGGA CTCGCGGCGA CCGGCCTGTC ACGCGCGCAG
ATGCCGCGCC TCGTCGAAGG CTGCGCGCCG GCCGGCCGGC TGCGCCCGGA GCTCGCGGCG
CGCTGGGGCA TGACGAAGCG CCCGCTCATC GCCGGAGGCG CCGGCGACAA TCCGGCGGGC
GCGATCGGCA TCGGCGCGAT CCGGCCCGGC GCCACCTTCA TCACGCTCGG CACATCGGGC
GCCGTGATCA CGCCGGTCGA GACCGTCAAC GCCAATCCGG ATCGCGTCGT CCACACCTTC
TGTCATGCCG TCCCGGCGCT GTGGCTGCAG GCCGGCGCAA TGTTGTCGGC CGCCTCCTGC
CTTGCCTGGA TCGCGCGACT GCTCGGCGCC TCAGAGGCTG ATCTGCTGGC GCCGCTCGGC
GCCTGCCCCG CAGCGCCGTC GCCGGTCAGC TTCCTGCCCT ATCTTGCCGG CGAGCGGACG
CCGCATGACG ACGCCAATGT GCGCGGACTG CTCGACGGGC TGAGCCATGC CACCGACCGC
AGCGCGATCG TACAGGCCGT GCTCGAAGGC ATCGCCTTCG CGCTGGCCGA TTGCCGCGAC
GCGCTGACCG ATACGGGCCT GGCGATCGCG GAAGCGGATG CGATCGGCGG CGGCTCGCGC
TCCGACCTCT GGCTTGCGAT CCTGGCCAAT GTGCTGAACA TCCCGATTCA CCGGCTCGCC
GAAGGCGAGA CCGGCGCAGC CTTTGGTGCG GCGCGGCTCG CGCGCCTCGC GGTCACCGGC
GAGACGATCG CGAGCGTGTG CACGCCGCCG GCGCGGGTGC GGAGCTTCGC GCCGGATCAC
AGGCTCTCGG CAGACTATGC CGAGCGGCTG CCGCAGTGGC GCCGGCTCTA TCGGCGCCAG
GACTGA
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| Protein sequence | MYLGIDLGTS AVKTILVDDA QRVVASRSHN LTIDSPRAGW AEQDPGAWIA AVFATLDALK
ADHAGALAEV DGIGLSGQMH GPVLLDAGMT PLRSCILWND GRAAAECAVL EQRWPALRQV
TGNKAMPGFA APKLVWIANH EKAIFDAIHL VLLPKAYVRL VLSGEAIEDV SDASGSLWLD
VHKRDWSDAG LAATGLSRAQ MPRLVEGCAP AGRLRPELAA RWGMTKRPLI AGGAGDNPAG
AIGIGAIRPG ATFITLGTSG AVITPVETVN ANPDRVVHTF CHAVPALWLQ AGAMLSAASC
LAWIARLLGA SEADLLAPLG ACPAAPSPVS FLPYLAGERT PHDDANVRGL LDGLSHATDR
SAIVQAVLEG IAFALADCRD ALTDTGLAIA EADAIGGGSR SDLWLAILAN VLNIPIHRLA
EGETGAAFGA ARLARLAVTG ETIASVCTPP ARVRSFAPDH RLSADYAERL PQWRRLYRRQ
D
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