| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6707 |
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| Symbol | |
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| ID | 5155054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6986805 |
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| End bp | 6987938 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640561395 |
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| Product | putative diguanylate cyclase (GGDEF) |
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| Protein accession | YP_001242509 |
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| Protein GI | 148257924 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.282449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0224535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAT TGGACTCGGA AACTCGTCGC GAGCTGGCGC ATCTGCTTTA CAGCTCGATG
CCGCTGGTCG GGACGATCTC GGCCGGGGCC GTCGTGATCG GGGCCGTGAT GGCGTGGGTC
GCCCGCGATC CGGGCTATGC CGCCATCACC ATGGCGCTGT TGGTGATCGG CGTCTTCCGC
GTCGTCAAGC TGTTGATGTT CGCAGCGCGT TTCGATCAGC TCGACGACGC CGACATCATC
CGCTGGGAGC GTCTCTATGG CCTCGGCGCC GCCGCGTTCG GGCTTGCGGT CGGCGGCCTG
TCGGCCCGCG CCTTTCAGAT CGGCGACGGG CCCGGCATCT GGATGTGCTT CGGCCTGTCG
ATGTCATTCT GCGTCGGCAT CGTCTCGCGC GTCAGTCCGT GGATCGTGAT GAGTTCGTCC
GCGGTGCTGC TGATTCCGAC CGTGATCGCC TGTGTGCTGC AGCCGGAGCC GGTCTTTCGC
ATGGGCGCTG CAATGCTGGT GCTGTTCTGG ATCACCCTGC GCGGCACATC CTACCGGCTC
ACCGCCGCGT TCACCGAGCG GATCGAGGCG CAGCAGGCGC TGCGCCGCCA GGCGCATCAG
GATTTCCTCA CCGGCCTGCC GAACCGGGCC GCCTTCATCG CGGCATTGCG CGGGCTCGAT
GGCCCCGCGG CGATCATCGC GATCGATCTC GACGGCTTCA AGAGCATCAA TGACGCGTTC
GGCCACCAGG CCGGCGACGA GCTGCTGTGC CAGGTCGGCG CGCGGCTGCG CCAATGCCTC
GGTGACAGCG GCCTTGCGGC GCGGTTTGGC GGCGACGAAT TCATGCTGCT GCTTCCGGTT
GCGGCAGCGC AGCCGGGCCG CGATGCGGCC GGGGCATTGG CGCGCCGCGT TGTGAGCTCG
CTCGCCGATC CATTTGTGCT GGCTGGAACC CGCGTGCAGA TCGGCGCCAG CGCCGGCATT
CTGCTCGCCG AGCATCGGAC AGCAGAAACC GAGGCGCTGA TCGACCAGGC CGATCGCGCG
CTCTACGCCG CCAAACGGGC CGGCGGGCAC CAATGGCGCT GGGCCGATGA GGAGCCCGCC
GACACCGATT GGACGCGGGC TGACGACACC CCGGCGCTGG CGCCCGCGGT CTGA
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| Protein sequence | MQRLDSETRR ELAHLLYSSM PLVGTISAGA VVIGAVMAWV ARDPGYAAIT MALLVIGVFR
VVKLLMFAAR FDQLDDADII RWERLYGLGA AAFGLAVGGL SARAFQIGDG PGIWMCFGLS
MSFCVGIVSR VSPWIVMSSS AVLLIPTVIA CVLQPEPVFR MGAAMLVLFW ITLRGTSYRL
TAAFTERIEA QQALRRQAHQ DFLTGLPNRA AFIAALRGLD GPAAIIAIDL DGFKSINDAF
GHQAGDELLC QVGARLRQCL GDSGLAARFG GDEFMLLLPV AAAQPGRDAA GALARRVVSS
LADPFVLAGT RVQIGASAGI LLAEHRTAET EALIDQADRA LYAAKRAGGH QWRWADEEPA
DTDWTRADDT PALAPAV
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