| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6701 |
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| Symbol | |
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| ID | 5155780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6978226 |
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| End bp | 6979380 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640561389 |
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| Product | putative diguanylate cyclase (GGDEF) |
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| Protein accession | YP_001242503 |
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| Protein GI | 148257918 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.125702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCATG GTGGTTCCAT GGGACATGGG CAGTCTTCCA GATTCGTTGA TCCGAACCCG
GCGATCCGGC GCGAGCTGGT CGAGCTCCTG TACACGTCCC TGCCGCAGGT GATGTCGATC
AACGCGGCCG CGATCACCGG ATCGGTCACG CTGGCCGTCC TGCATCGCGA CCCCGGCTAC
ATCGCGATCA CGTTCGCGAT CATCGTCAAC GCGATCGGCC GCGTGGTCAG CCTGCTCCGC
TACAAGCAGC GCAGCGCCCG CCTCTCCGAC CGGGACGTGG TGCTCTGGGA AAAGGTCTAT
GCCGCCGGCG CAACCGCCTT TGGCCTCGCG CTCGGCGCCC TCACCTTTCG GGCCTTTCAG
CTCAACGATG CGCCGGGCGC GTGGATCGCG TTCGGACTGT CGATGTCCTA TTGCGTCGGC
ATGGTCTCGC GCGCGGCGAT CCGCCCCTGG GTGGTGCTGA CGACAACCGC CGTGCTGTTC
GCGCCCACAT TGGTGGCCGG CTTGATGCGC CCGGAGCTGC CCTACCAGCT CGGCGCCGCA
ATGCTCGTCC TGTTCTGGTT CTCGATCCGC GAAGCATCGC GCCATCTCAG CACCGCGTTC
ATCGAGCGAC TCGAGGCCAA ACATGCGCTG GCCCGCCAGG CCAACCACGA CTTCCTGACC
GGCCTGCCGA ATCGGGCCGC GTTCCTCGCC GCACTGGAGC GCACCACAGG CAGCGTCGCG
ATCATCGCCA TCGATCTCGA CGGCTTCAAG CCGGTCAACG ATCGCCACGG TCACCATGCC
GGCGATGAGC TACTGCGCCA GGTCGCGACG CGGCTGTCGG ATTGCGTAGG CTCAGGCGGC
CTTGCCGCGC GCTTCGGTGG CGACGAGTTC ATGCTGCTGA AGCCGGTCGC AGACGGTGCC
GAAGGACGCG ATGAATCGAT GGCGCTGGCG CGCGAGGCCG TCCGCACCTT GTCGATGCCG
TTCCTGCTGT CCGATATCCC CATGGTGATC GGCGCCAGCG CCGGACTGCT CGTGAACGAG
CGGCCGCTGA CGGACGACAC GGTCGACGAG GTGCTGCGCC GGGTCGACGA GGCGCTTTAT
GCGGCCAAGC GCGCCGGTGG CGGCCGCTGT AGCTGGGCCG ACGCCGACAC CGCACAGCTT
CGTCAGGCCG GCTGA
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| Protein sequence | MSHGGSMGHG QSSRFVDPNP AIRRELVELL YTSLPQVMSI NAAAITGSVT LAVLHRDPGY
IAITFAIIVN AIGRVVSLLR YKQRSARLSD RDVVLWEKVY AAGATAFGLA LGALTFRAFQ
LNDAPGAWIA FGLSMSYCVG MVSRAAIRPW VVLTTTAVLF APTLVAGLMR PELPYQLGAA
MLVLFWFSIR EASRHLSTAF IERLEAKHAL ARQANHDFLT GLPNRAAFLA ALERTTGSVA
IIAIDLDGFK PVNDRHGHHA GDELLRQVAT RLSDCVGSGG LAARFGGDEF MLLKPVADGA
EGRDESMALA REAVRTLSMP FLLSDIPMVI GASAGLLVNE RPLTDDTVDE VLRRVDEALY
AAKRAGGGRC SWADADTAQL RQAG
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