| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6654 |
|---|
| Symbol | |
|---|
| ID | 5151425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6926840 |
|---|
| End bp | 6927412 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640561346 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001242460 |
|---|
| Protein GI | 148257875 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.21355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGT CTATTGCTTT TGGAATTGCT GCGGTCGCGT CGCTCGCGAG CACCGCAATG
GCGCGTGCGG AGTTCTTCGA TTCGCGTGAC GTCTTCGGCG GCGGGCCGAA CTTCTTCCAG
GGCGGCGTCA GCCCGATTCC ACGGGAGACG GTAATGTTCC AGGGCCAGTA TGCGCCCGGC
ACCATCGTTG TGAGCACGTC AGAGCGCCGG CTCTATCTGG TGCTGGGGAA CGGCCAGGCG
CTGCGCTACG GCATCGGCGT CGGCCGCGAT GGGTTCCGCT GGAGCGGCGT GCATCGCATC
ACCGCCAAGA AGGAGTGGCC GGCCTGGACC CCGCCGGCAC AGATGCTGCG CCGCCGTCCC
GATCTGCCGC GTCACATGGC GGGCGGCATC GAAAACCCGC TCGGCGCCCG CGCGATGTAT
CTCGGCTCCA CGCTGTACCG CATCCACGGC TCCAACGAGC CGGAGACGAT CGGCCAGGCG
GTGTCGTCGG GCTGCTTCCG CATGACCAAC GAGGACGTCG CTGACCTCTA TGATCGCGTG
GCGGTCGGCA CGACCGTGAT CGTCAAGAAC TGA
|
|---|
| Protein sequence | MKRSIAFGIA AVASLASTAM ARAEFFDSRD VFGGGPNFFQ GGVSPIPRET VMFQGQYAPG
TIVVSTSERR LYLVLGNGQA LRYGIGVGRD GFRWSGVHRI TAKKEWPAWT PPAQMLRRRP
DLPRHMAGGI ENPLGARAMY LGSTLYRIHG SNEPETIGQA VSSGCFRMTN EDVADLYDRV
AVGTTVIVKN
|
|---|
| |