| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6642 |
|---|
| Symbol | |
|---|
| ID | 5150081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6910551 |
|---|
| End bp | 6911363 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640561334 |
|---|
| Product | anaerobic benzoate catabolism transcriptional regulator |
|---|
| Protein accession | YP_001242448 |
|---|
| Protein GI | 148257863 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0597755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.174311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGAAGG CGCGGGAACG CCGCGGCATC TCCCGGAACA AGCTGGCCGA ATTGTCGCGC
GTGTCGCTGC GCTACCTCGC TCAGCTCGAG AGCGGAAGCG GCAACATCTC GATTGCGCTG
TTGTGGCGGA TCTCCGAAGC GCTCGATCAC CGCATGGAAT GGCTGGTGGG ATCCGACGAT
CCCTGGACCT CCGAGGTGGT CCGCTGCGCC GAGCTGTTCC GCGAGGCCAA GCGCGAGCAG
CGTCGGCAGG TGATGCGGAT CCTCGATCCG AGCCAGCCGG CGCAGCTGCG GCAGAAGCGG
CTATGCCTGA TCGGTCTGCG CGGCGCCGGC AAGACGACAT TGGGGAAGCG GCTGGGCCAG
GCGCTGGCAC TGCCCTTCGT CGAGCTGAAC AGGGAGATCG AGGAGGTCAG CGGCATCCCC
GTCAACGAGG TCCTGGCGCT GTATGGCCAG GAGGGATATC GCCATCTGGA GCGGCGCGCG
CTCGAGCGTG TCGTGGCGAC CGCCGACGAG GTCGTGCTGG CGGTGGCCGG CGGCATCGTG
GCGGAGCCCG AGACCTTCGC CTTCCTGCTG CGGCACTTCC ATACGATCTG GCTGAAGGCC
CGCGCCGACG AGCACATGGA GCGGGTCCGC GCCCAGGGCG ATCTGCGTCC GATGAGCGGC
AATCCGCAGG CGATGGACGA GCTGAAGTCG ATCCTCGCAA GCCGCGAGGA GCTTTACGCG
CAGGCGGAGC TCATGGTGGA TACCAGCGGC CGGACCCCGG ACGAAACCAC GCGCGATCTG
GTCGACAGCA TCGCCAAGCT CGGCATCGTC TAA
|
|---|
| Protein sequence | MRKARERRGI SRNKLAELSR VSLRYLAQLE SGSGNISIAL LWRISEALDH RMEWLVGSDD
PWTSEVVRCA ELFREAKREQ RRQVMRILDP SQPAQLRQKR LCLIGLRGAG KTTLGKRLGQ
ALALPFVELN REIEEVSGIP VNEVLALYGQ EGYRHLERRA LERVVATADE VVLAVAGGIV
AEPETFAFLL RHFHTIWLKA RADEHMERVR AQGDLRPMSG NPQAMDELKS ILASREELYA
QAELMVDTSG RTPDETTRDL VDSIAKLGIV
|
|---|
| |